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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE
RRCEMVFIRGDTVTLISTPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bw1-a1-m4-cB 86 80 1.0000 0.9302 1.0000 8.35e-55 3bw1-a1-m4-cA_3bw1-a1-m4-cB
2 3bw1-a1-m4-cA 86 80 1.0000 0.9302 1.0000 8.35e-55 3bw1-a1-m4-cA_3bw1-a1-m4-cB
3 4n0a-a1-m2-cB 80 80 1.0000 1.0000 1.0000 9.50e-55 4n0a-a1-m1-cA_4n0a-a1-m2-cB
4 4n0a-a1-m1-cA 80 80 1.0000 1.0000 1.0000 9.50e-55 4n0a-a1-m1-cA_4n0a-a1-m2-cB
5 4n0a-a1-m2-cF 75 79 0.9375 1.0000 0.9494 7.20e-49 4n0a-a1-m2-cE_4n0a-a1-m2-cF
6 4n0a-a1-m2-cE 68 80 0.8500 1.0000 0.8500 4.92e-42 4n0a-a1-m2-cE_4n0a-a1-m2-cF
7 4emg-a2-m1-cN 69 76 0.4625 0.5362 0.4868 2.67e-16 4emg-a2-m1-cK_4emg-a2-m1-cN
8 4emg-a2-m1-cK 69 76 0.4625 0.5362 0.4868 2.67e-16 4emg-a2-m1-cK_4emg-a2-m1-cN
9 1th7-a1-m1-cN 78 76 0.3375 0.3462 0.3553 1.47e-08 1th7-a1-m1-cF_1th7-a1-m1-cN, 1th7-a1-m1-cH_1th7-a1-m1-cN
10 1th7-a1-m1-cH 78 76 0.3375 0.3462 0.3553 1.47e-08 1th7-a1-m1-cH_1th7-a1-m1-cN
11 1th7-a1-m1-cF 78 76 0.3375 0.3462 0.3553 1.47e-08 1th7-a1-m1-cF_1th7-a1-m1-cN
12 3pgg-a1-m3-cA 78 73 0.2375 0.2436 0.2603 8.49e-06 3pgg-a1-m3-cA_3pgg-a1-m3-cB
13 3pgg-a1-m3-cB 80 73 0.2375 0.2375 0.2603 2.99e-05 3pgg-a1-m3-cA_3pgg-a1-m3-cB
14 4xq3-a1-m1-cC 77 76 0.3000 0.3117 0.3158 3.85e-04 4xq3-a1-m1-cB_4xq3-a1-m1-cC
15 4xq3-a1-m1-cB 77 76 0.3000 0.3117 0.3158 3.85e-04 4xq3-a1-m1-cB_4xq3-a1-m1-cC
16 5ddt-a1-m1-cB 232 29 0.1250 0.0431 0.3448 2.1 5ddt-a1-m1-cA_5ddt-a1-m1-cB
17 5ddt-a1-m1-cA 232 29 0.1250 0.0431 0.3448 2.1 5ddt-a1-m1-cA_5ddt-a1-m1-cB
18 1orr-a3-m1-cC 335 45 0.1500 0.0358 0.2667 2.9 1orr-a3-m1-cC_1orr-a3-m1-cA
19 1orr-a1-m1-cC 335 45 0.1500 0.0358 0.2667 2.9 1orr-a1-m1-cC_1orr-a1-m1-cD
20 1orr-a1-m1-cD 336 45 0.1500 0.0357 0.2667 2.9 1orr-a1-m1-cC_1orr-a1-m1-cD
21 1orr-a3-m1-cA 338 45 0.1500 0.0355 0.2667 2.9 1orr-a3-m1-cC_1orr-a3-m1-cA
22 4olp-a2-m3-cC 87 41 0.2000 0.1839 0.3902 9.4 4olp-a2-m3-cD_4olp-a2-m3-cC

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Reference:
Jacob Schwartz et al.

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