HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=67)
METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAGETWDEWFDGHSVSADF
MDNREQP

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	6sd6-a1-m2-cB	67	67	1.0000	1.0000	1.0000	1.99e-45	6sd6-a1-m2-cB_6sd6-a1-m1-cA
2	6sd6-a1-m1-cA	68	67	1.0000	0.9853	1.0000	2.42e-45	6sd6-a1-m2-cB_6sd6-a1-m1-cA
3	6ifm-a1-m1-cH	68	67	0.6866	0.6765	0.6866	9.06e-33	6ifm-a1-m1-cB_6ifm-a1-m1-cH
4	6ifm-a1-m1-cB	68	67	0.6866	0.6765	0.6866	9.06e-33	6ifm-a1-m1-cB_6ifm-a1-m1-cH
5	3zvk-a1-m1-cH	57	51	0.2687	0.3158	0.3529	1.86e-05	3zvk-a1-m1-cE_3zvk-a1-m1-cH
6	3zvk-a1-m1-cE	57	51	0.2687	0.3158	0.3529	1.99e-05	3zvk-a1-m1-cE_3zvk-a1-m1-cH
7	2e1f-a2-m2-cA	94	37	0.1642	0.1170	0.2973	0.36	2e1f-a2-m1-cA_2e1f-a2-m2-cA
8	2e1f-a2-m1-cA	94	37	0.1642	0.1170	0.2973	0.36	2e1f-a2-m1-cA_2e1f-a2-m2-cA
9	7jqz-a1-m1-cJ	294	51	0.2537	0.0578	0.3333	0.68	7jqz-a1-m1-cB_7jqz-a1-m1-cJ, 7jqz-a1-m1-cG_7jqz-a1-m1-cJ, 7jqz-a1-m1-cI_7jqz-a1-m1-cJ
10	7jqz-a1-m1-cI	294	51	0.2537	0.0578	0.3333	0.68	7jqz-a1-m1-cI_7jqz-a1-m1-cJ
11	7jqz-a1-m1-cG	294	51	0.2537	0.0578	0.3333	0.68	7jqz-a1-m1-cG_7jqz-a1-m1-cJ
12	7jqz-a1-m1-cB	294	51	0.2537	0.0578	0.3333	0.68	7jqz-a1-m1-cB_7jqz-a1-m1-cJ
13	3tgv-a2-m1-cD	142	31	0.1940	0.0915	0.4194	0.92	3tgv-a2-m1-cC_3tgv-a2-m1-cD
14	3tgv-a2-m1-cC	142	31	0.1940	0.0915	0.4194	0.92	3tgv-a2-m1-cC_3tgv-a2-m1-cD
15	4j00-a1-m1-cB	297	49	0.2537	0.0572	0.3469	3.1	4j00-a1-m1-cA_4j00-a1-m1-cB
16	4j00-a1-m1-cA	297	49	0.2537	0.0572	0.3469	3.1	4j00-a1-m1-cA_4j00-a1-m1-cB
17	4r0k-a1-m1-cA	292	13	0.1194	0.0274	0.6154	4.0	4r0k-a1-m1-cA_4r0k-a1-m1-cB
18	4r0k-a1-m1-cB	293	13	0.1194	0.0273	0.6154	4.2	4r0k-a1-m1-cA_4r0k-a1-m1-cB
19	3npf-a1-m1-cB	287	13	0.1194	0.0279	0.6154	4.9	3npf-a1-m1-cB_3npf-a1-m1-cA
20	3npf-a1-m1-cA	294	13	0.1194	0.0272	0.6154	5.6	3npf-a1-m1-cB_3npf-a1-m1-cA
21	4h7l-a1-m1-cB	115	51	0.2090	0.1217	0.2745	5.8	4h7l-a1-m1-cA_4h7l-a1-m1-cB
22	1sjd-a1-m2-cD	367	31	0.1791	0.0327	0.3871	5.8	1sjd-a1-m1-cA_1sjd-a1-m2-cD, 1sjd-a1-m2-cC_1sjd-a1-m2-cD
23	1sjd-a1-m2-cC	367	31	0.1791	0.0327	0.3871	5.8	1sjd-a1-m2-cC_1sjd-a1-m2-cD
24	1sjd-a1-m1-cA	367	31	0.1791	0.0327	0.3871	5.8	1sjd-a1-m1-cA_1sjd-a1-m2-cD
25	5fjt-a1-m2-cC	367	31	0.1791	0.0327	0.3871	5.9	5fjt-a1-m1-cB_5fjt-a1-m2-cC
26	5fjt-a1-m1-cB	367	31	0.1791	0.0327	0.3871	5.9	5fjt-a1-m1-cB_5fjt-a1-m2-cC
27	5ylk-a3-m1-cB	309	13	0.1045	0.0227	0.5385	9.0	5ylk-a3-m1-cA_5ylk-a3-m1-cB
28	5ylk-a3-m1-cA	309	13	0.1045	0.0227	0.5385	9.0	5ylk-a3-m1-cA_5ylk-a3-m1-cB
29	1t3b-a1-m2-cA	209	46	0.2239	0.0718	0.3261	9.7	1t3b-a1-m1-cA_1t3b-a1-m2-cA
30	1t3b-a1-m1-cA	209	46	0.2239	0.0718	0.3261	9.7	1t3b-a1-m1-cA_1t3b-a1-m2-cA
31	5l6l-a1-m1-cH	80	38	0.2090	0.1750	0.3684	9.8	5l6l-a1-m1-cE_5l6l-a1-m1-cH

[Back]

Reference:
Jacob Schwartz et al.