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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAGETWDEWFDGHSVSADF
MDNREQPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sd6-a1-m1-cA 68 68 1.0000 1.0000 1.0000 3.13e-46 6sd6-a1-m2-cB_6sd6-a1-m1-cA
2 6sd6-a1-m2-cB 67 67 0.9853 1.0000 1.0000 2.45e-45 6sd6-a1-m2-cB_6sd6-a1-m1-cA
3 6ifm-a1-m1-cH 68 68 0.6765 0.6765 0.6765 1.01e-32 6ifm-a1-m1-cB_6ifm-a1-m1-cH
4 6ifm-a1-m1-cB 68 68 0.6765 0.6765 0.6765 1.01e-32 6ifm-a1-m1-cB_6ifm-a1-m1-cH
5 3zvk-a1-m1-cH 57 51 0.2647 0.3158 0.3529 2.08e-05 3zvk-a1-m1-cE_3zvk-a1-m1-cH
6 3zvk-a1-m1-cE 57 51 0.2647 0.3158 0.3529 2.22e-05 3zvk-a1-m1-cE_3zvk-a1-m1-cH
7 2e1f-a2-m2-cA 94 37 0.1618 0.1170 0.2973 0.39 2e1f-a2-m1-cA_2e1f-a2-m2-cA
8 2e1f-a2-m1-cA 94 37 0.1618 0.1170 0.2973 0.39 2e1f-a2-m1-cA_2e1f-a2-m2-cA
9 7jqz-a1-m1-cJ 294 51 0.2500 0.0578 0.3333 0.71 7jqz-a1-m1-cB_7jqz-a1-m1-cJ, 7jqz-a1-m1-cG_7jqz-a1-m1-cJ, 7jqz-a1-m1-cI_7jqz-a1-m1-cJ
10 7jqz-a1-m1-cI 294 51 0.2500 0.0578 0.3333 0.71 7jqz-a1-m1-cI_7jqz-a1-m1-cJ
11 7jqz-a1-m1-cG 294 51 0.2500 0.0578 0.3333 0.71 7jqz-a1-m1-cG_7jqz-a1-m1-cJ
12 7jqz-a1-m1-cB 294 51 0.2500 0.0578 0.3333 0.71 7jqz-a1-m1-cB_7jqz-a1-m1-cJ
13 3tgv-a2-m1-cD 142 31 0.1912 0.0915 0.4194 1.0 3tgv-a2-m1-cC_3tgv-a2-m1-cD
14 3tgv-a2-m1-cC 142 31 0.1912 0.0915 0.4194 1.0 3tgv-a2-m1-cC_3tgv-a2-m1-cD
15 4r0k-a1-m1-cA 292 13 0.1176 0.0274 0.6154 4.4 4r0k-a1-m1-cA_4r0k-a1-m1-cB
16 4r0k-a1-m1-cB 293 13 0.1176 0.0273 0.6154 4.4 4r0k-a1-m1-cA_4r0k-a1-m1-cB
17 3npf-a1-m1-cB 287 13 0.1176 0.0279 0.6154 5.2 3npf-a1-m1-cB_3npf-a1-m1-cA
18 4h7l-a1-m1-cB 115 52 0.2059 0.1217 0.2692 5.4 4h7l-a1-m1-cA_4h7l-a1-m1-cB
19 3npf-a1-m1-cA 294 13 0.1176 0.0272 0.6154 5.9 3npf-a1-m1-cB_3npf-a1-m1-cA
20 5fjt-a1-m2-cC 367 31 0.1765 0.0327 0.3871 7.7 5fjt-a1-m1-cB_5fjt-a1-m2-cC
21 5fjt-a1-m1-cB 367 31 0.1765 0.0327 0.3871 7.7 5fjt-a1-m1-cB_5fjt-a1-m2-cC
22 1sjd-a1-m2-cD 367 31 0.1765 0.0327 0.3871 7.7 1sjd-a1-m1-cA_1sjd-a1-m2-cD, 1sjd-a1-m2-cC_1sjd-a1-m2-cD
23 1sjd-a1-m2-cC 367 31 0.1765 0.0327 0.3871 7.7 1sjd-a1-m2-cC_1sjd-a1-m2-cD
24 1sjd-a1-m1-cA 367 31 0.1765 0.0327 0.3871 7.7 1sjd-a1-m1-cA_1sjd-a1-m2-cD
25 5ylk-a3-m1-cB 309 13 0.1029 0.0227 0.5385 8.6 5ylk-a3-m1-cA_5ylk-a3-m1-cB
26 5ylk-a3-m1-cA 309 13 0.1029 0.0227 0.5385 8.6 5ylk-a3-m1-cA_5ylk-a3-m1-cB
27 1t3b-a1-m2-cA 209 46 0.2206 0.0718 0.3261 10.0 1t3b-a1-m1-cA_1t3b-a1-m2-cA
28 1t3b-a1-m1-cA 209 46 0.2206 0.0718 0.3261 10.0 1t3b-a1-m1-cA_1t3b-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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