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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MEVMRVRSDLIATRRIPGLKNISLRVMEDATGKVSVACDPIGVPEGCWVFTISGSAARFG
VGDFEILTDLTIGGIIDLEHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6jy5-a1-m1-cD 82 82 1.0000 1.0000 1.0000 6.45e-56 6jy5-a1-m1-cB_6jy5-a1-m1-cD
2 6jy5-a1-m1-cB 82 82 1.0000 1.0000 1.0000 6.45e-56 6jy5-a1-m1-cB_6jy5-a1-m1-cD
3 2rcf-a1-m1-cE 80 78 0.3780 0.3875 0.3974 3.69e-09 2rcf-a1-m1-cD_2rcf-a1-m1-cE
4 2rcf-a1-m1-cD 80 78 0.3780 0.3875 0.3974 3.69e-09 2rcf-a1-m1-cD_2rcf-a1-m1-cE
5 2z9h-a1-m1-cB 97 83 0.3293 0.2784 0.3253 6.60e-05 2z9h-a1-m1-cC_2z9h-a1-m1-cB
6 2hd3-a1-m1-cD 93 76 0.3293 0.2903 0.3553 4.73e-04 2hd3-a1-m1-cC_2hd3-a1-m1-cD
7 4jw0-a1-m1-cD 95 83 0.3171 0.2737 0.3133 4.93e-04 4jw0-a1-m1-cC_4jw0-a1-m1-cD
8 4jw0-a1-m1-cC 95 83 0.3171 0.2737 0.3133 4.93e-04 4jw0-a1-m1-cC_4jw0-a1-m1-cD
9 2qw7-a2-m1-cJ 96 83 0.3049 0.2604 0.3012 6.82e-04 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
10 2qw7-a2-m1-cI 96 83 0.3049 0.2604 0.3012 6.82e-04 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
11 2z9h-a1-m1-cC 83 83 0.2927 0.2892 0.2892 0.16 2z9h-a1-m1-cC_2z9h-a1-m1-cB
12 2hd3-a1-m1-cC 81 76 0.3049 0.3086 0.3289 0.17 2hd3-a1-m1-cC_2hd3-a1-m1-cD
13 3pm5-a6-m1-cD 469 38 0.1707 0.0299 0.3684 0.51 3pm5-a6-m1-cD_3pm5-a6-m1-cC
14 3pm5-a6-m1-cC 475 38 0.1707 0.0295 0.3684 0.51 3pm5-a6-m1-cD_3pm5-a6-m1-cC
15 3l8m-a1-m3-cA 189 29 0.1341 0.0582 0.3793 2.0 3l8m-a1-m2-cA_3l8m-a1-m3-cA
16 3l8m-a1-m2-cA 189 29 0.1341 0.0582 0.3793 2.0 3l8m-a1-m2-cA_3l8m-a1-m3-cA
17 3k3f-a1-m3-cA 332 23 0.1341 0.0331 0.4783 3.2 3k3f-a1-m2-cA_3k3f-a1-m3-cA
18 3k3f-a1-m2-cA 332 23 0.1341 0.0331 0.4783 3.2 3k3f-a1-m2-cA_3k3f-a1-m3-cA
19 5yyc-a1-m1-cC 368 45 0.1585 0.0353 0.2889 3.8 5yyc-a1-m1-cA_5yyc-a1-m1-cC
20 5yyc-a1-m1-cA 368 45 0.1585 0.0353 0.2889 3.8 5yyc-a1-m1-cA_5yyc-a1-m1-cC
21 2vz8-a1-m1-cA 1962 33 0.1463 0.0061 0.3636 6.9 2vz8-a1-m1-cA_2vz8-a1-m1-cB
22 2vz8-a1-m1-cB 2004 33 0.1463 0.0060 0.3636 6.9 2vz8-a1-m1-cA_2vz8-a1-m1-cB
23 7f38-a1-m9-cH 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m9-cB_7f38-a1-m9-cH
24 7f38-a1-m9-cG 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m8-cG_7f38-a1-m9-cG
25 7f38-a1-m9-cE 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m55-cA_7f38-a1-m9-cE
26 7f38-a1-m9-cD 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m9-cB_7f38-a1-m9-cD
27 7f38-a1-m9-cB 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m57-cA_7f38-a1-m9-cB, 7f38-a1-m9-cB_7f38-a1-m9-cD, 7f38-a1-m9-cB_7f38-a1-m9-cH
28 7f38-a1-m8-cG 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m8-cG_7f38-a1-m9-cG
29 7f38-a1-m57-cA 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m57-cA_7f38-a1-m9-cB
30 7f38-a1-m55-cA 363 17 0.1220 0.0275 0.5882 7.2 7f38-a1-m55-cA_7f38-a1-m9-cE
31 2p25-a1-m2-cA 124 37 0.1707 0.1129 0.3784 8.3 2p25-a1-m1-cA_2p25-a1-m2-cA
32 2p25-a1-m1-cA 124 37 0.1707 0.1129 0.3784 8.3 2p25-a1-m1-cA_2p25-a1-m2-cA
33 2v5r-a1-m1-cB 391 22 0.1220 0.0256 0.4545 9.2 2v5r-a1-m1-cA_2v5r-a1-m1-cB
34 2v5r-a1-m1-cA 391 22 0.1220 0.0256 0.4545 9.2 2v5r-a1-m1-cA_2v5r-a1-m1-cB
35 1vi9-a2-m1-cD 279 57 0.1951 0.0573 0.2807 9.5 1vi9-a2-m1-cC_1vi9-a2-m1-cD
36 1vi9-a2-m1-cC 279 57 0.1951 0.0573 0.2807 9.5 1vi9-a2-m1-cC_1vi9-a2-m1-cD
37 4xb7-a1-m1-cB 395 22 0.1220 0.0253 0.4545 9.9 4xb7-a1-m1-cA_4xb7-a1-m1-cB
38 4xb7-a1-m1-cA 395 22 0.1220 0.0253 0.4545 9.9 4xb7-a1-m1-cA_4xb7-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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