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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREK
LHTVKVLSASSYSPDEWERQCKVAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4hn7-a1-m2-cA 85 85 1.0000 1.0000 1.0000 6.91e-60 4hn7-a1-m1-cA_4hn7-a1-m2-cA
2 4hn7-a1-m1-cA 85 85 1.0000 1.0000 1.0000 6.91e-60 4hn7-a1-m1-cA_4hn7-a1-m2-cA
3 4eez-a2-m2-cA 339 53 0.2000 0.0501 0.3208 0.44 4eez-a2-m2-cA_4eez-a2-m2-cB
4 4eez-a2-m1-cA 339 53 0.2000 0.0501 0.3208 0.44 4eez-a2-m1-cA_4eez-a2-m2-cB
5 4eez-a2-m2-cB 342 53 0.2000 0.0497 0.3208 0.47 4eez-a2-m1-cA_4eez-a2-m2-cB, 4eez-a2-m1-cB_4eez-a2-m2-cB, 4eez-a2-m2-cA_4eez-a2-m2-cB
6 4eez-a2-m1-cB 342 53 0.2000 0.0497 0.3208 0.47 4eez-a2-m1-cB_4eez-a2-m2-cB
7 6nl2-a1-m1-cB 593 35 0.1412 0.0202 0.3429 0.84 6nl2-a1-m1-cB_6nl2-a1-m1-cA
8 6nl2-a1-m1-cA 594 35 0.1412 0.0202 0.3429 0.84 6nl2-a1-m1-cB_6nl2-a1-m1-cA
9 1kqf-a1-m3-cB 289 38 0.1529 0.0450 0.3421 2.1 1kqf-a1-m2-cB_1kqf-a1-m3-cB
10 1kqf-a1-m2-cB 289 38 0.1529 0.0450 0.3421 2.1 1kqf-a1-m2-cB_1kqf-a1-m3-cB
11 1bhp-a1-m4-cA 45 28 0.1529 0.2889 0.4643 2.9 1bhp-a1-m3-cA_1bhp-a1-m4-cA
12 1bhp-a1-m3-cA 45 28 0.1529 0.2889 0.4643 2.9 1bhp-a1-m3-cA_1bhp-a1-m4-cA
13 6k8s-a1-m1-cB 662 53 0.1529 0.0196 0.2453 3.2 6k8s-a1-m1-cA_6k8s-a1-m1-cB
14 6k8s-a1-m1-cA 662 53 0.1529 0.0196 0.2453 3.2 6k8s-a1-m1-cA_6k8s-a1-m1-cB
15 2plh-a1-m4-cA 45 28 0.1529 0.2889 0.4643 4.1 2plh-a1-m3-cA_2plh-a1-m4-cA
16 2plh-a1-m3-cA 45 28 0.1529 0.2889 0.4643 4.1 2plh-a1-m3-cA_2plh-a1-m4-cA
17 3tr3-a2-m2-cB 79 16 0.0941 0.1013 0.5000 6.1 3tr3-a2-m1-cA_3tr3-a2-m2-cB
18 3tr3-a1-m1-cB 79 16 0.0941 0.1013 0.5000 6.1 3tr3-a1-m1-cA_3tr3-a1-m1-cB
19 3tr3-a2-m1-cA 76 16 0.0941 0.1053 0.5000 6.4 3tr3-a2-m1-cA_3tr3-a2-m2-cB
20 3tr3-a1-m1-cA 76 16 0.0941 0.1053 0.5000 6.4 3tr3-a1-m1-cA_3tr3-a1-m1-cB
21 3dec-a1-m2-cA 969 40 0.1765 0.0155 0.3750 8.2 3dec-a1-m1-cA_3dec-a1-m2-cA
22 3dec-a1-m1-cA 969 40 0.1765 0.0155 0.3750 8.2 3dec-a1-m1-cA_3dec-a1-m2-cA
23 2rfg-a1-m1-cD 289 25 0.1294 0.0381 0.4400 8.8 2rfg-a1-m1-cA_2rfg-a1-m1-cD, 2rfg-a1-m1-cC_2rfg-a1-m1-cD
24 2rfg-a1-m1-cC 289 25 0.1294 0.0381 0.4400 8.8 2rfg-a1-m1-cC_2rfg-a1-m1-cD
25 2rfg-a1-m1-cA 289 25 0.1294 0.0381 0.4400 8.8 2rfg-a1-m1-cA_2rfg-a1-m1-cD
26 5els-a3-m1-cD 111 44 0.1529 0.1171 0.2955 8.9 5els-a3-m1-cE_5els-a3-m1-cD
27 5els-a3-m1-cE 110 44 0.1529 0.1182 0.2955 9.0 5els-a3-m1-cE_5els-a3-m1-cD
28 5els-a2-m1-cF 112 44 0.1529 0.1161 0.2955 9.8 5els-a2-m1-cF_5els-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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