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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ihw-a1-m1-cB 98 98 1.0000 1.0000 1.0000 3.15e-68 4ihw-a1-m1-cA_4ihw-a1-m1-cB
2 4ihw-a1-m1-cA 91 91 0.9286 1.0000 1.0000 1.72e-62 4ihw-a1-m1-cA_4ihw-a1-m1-cB
3 1ety-a1-m1-cB 78 93 0.7959 1.0000 0.8387 4.25e-47 1ety-a1-m1-cA_1ety-a1-m1-cB
4 1ety-a1-m1-cA 74 77 0.7245 0.9595 0.9221 6.51e-45 1ety-a1-m1-cA_1ety-a1-m1-cB
5 6m10-a3-m3-cD 81 71 0.4490 0.5432 0.6197 7.15e-29 6m10-a3-m1-cD_6m10-a3-m3-cD
6 6m10-a3-m1-cD 81 71 0.4490 0.5432 0.6197 7.15e-29 6m10-a3-m1-cD_6m10-a3-m3-cD
7 1ntc-a1-m1-cB 91 42 0.1633 0.1758 0.3810 6.81e-04 1ntc-a1-m1-cA_1ntc-a1-m1-cB
8 1ntc-a1-m1-cA 91 42 0.1633 0.1758 0.3810 6.81e-04 1ntc-a1-m1-cA_1ntc-a1-m1-cB
9 3abz-a1-m1-cD 823 35 0.1224 0.0146 0.3429 4.8 3abz-a1-m1-cB_3abz-a1-m1-cD, 3abz-a1-m1-cD_3abz-a1-m1-cC
10 3abz-a1-m1-cC 826 35 0.1224 0.0145 0.3429 4.9 3abz-a1-m1-cD_3abz-a1-m1-cC
11 3abz-a1-m1-cB 800 35 0.1224 0.0150 0.3429 5.2 3abz-a1-m1-cB_3abz-a1-m1-cD
12 4l5e-a1-m2-cA 46 32 0.1224 0.2609 0.3750 7.9 4l5e-a1-m1-cA_4l5e-a1-m2-cA
13 4l5e-a1-m1-cA 46 32 0.1224 0.2609 0.3750 7.9 4l5e-a1-m1-cA_4l5e-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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