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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
MFIYYKRTKQGSTEQWFVIGGKRIYLPTMTYVNEANDLIKRYGGNTNVTTYNHDNFGLKM
MEAALPQVKV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6l00-a1-m4-cA 70 70 1.0000 1.0000 1.0000 1.18e-48 6l00-a1-m2-cA_6l00-a1-m4-cA
2 6l00-a1-m2-cA 70 70 1.0000 1.0000 1.0000 1.18e-48 6l00-a1-m2-cA_6l00-a1-m4-cA
3 6ist-a1-m1-cD 70 70 1.0000 1.0000 1.0000 1.18e-48 6ist-a1-m1-cD_6ist-a1-m1-cC
4 6ist-a1-m1-cC 213 70 1.0000 0.3286 1.0000 6.93e-47 6ist-a1-m1-cD_6ist-a1-m1-cC
5 6xmb-a2-m2-cC 113 35 0.1429 0.0885 0.2857 0.16 6xmb-a2-m1-cC_6xmb-a2-m2-cC
6 6xmb-a2-m1-cC 113 35 0.1429 0.0885 0.2857 0.16 6xmb-a2-m1-cC_6xmb-a2-m2-cC
7 1gd9-a1-m1-cB 388 46 0.2143 0.0387 0.3261 0.71 1gd9-a1-m1-cA_1gd9-a1-m1-cB
8 1gd9-a1-m1-cA 388 46 0.2143 0.0387 0.3261 0.71 1gd9-a1-m1-cA_1gd9-a1-m1-cB
9 1o5w-a2-m1-cC 512 57 0.2143 0.0293 0.2632 1.8 1o5w-a2-m1-cD_1o5w-a2-m1-cC
10 1o5w-a2-m1-cD 506 57 0.2143 0.0296 0.2632 1.8 1o5w-a2-m1-cD_1o5w-a2-m1-cC
11 3gae-a1-m1-cB 253 52 0.1857 0.0514 0.2500 2.8 3gae-a1-m1-cA_3gae-a1-m1-cB
12 3gae-a1-m1-cA 253 52 0.1857 0.0514 0.2500 2.8 3gae-a1-m1-cA_3gae-a1-m1-cB
13 6gj1-a1-m1-cB 583 23 0.1286 0.0154 0.3913 8.3 6gj1-a1-m1-cB_6gj1-a1-m1-cA
14 6gj1-a1-m1-cA 584 23 0.1286 0.0154 0.3913 8.3 6gj1-a1-m1-cB_6gj1-a1-m1-cA
15 1sow-a1-m2-cA 322 64 0.2429 0.0528 0.2656 8.5 1sow-a1-m2-cB_1sow-a1-m2-cA
16 1sow-a1-m1-cA 322 64 0.2429 0.0528 0.2656 8.5 1sow-a1-m2-cB_1sow-a1-m1-cA
17 1sow-a1-m2-cB 323 64 0.2429 0.0526 0.2656 8.5 1sow-a1-m2-cB_1sow-a1-m1-cA, 1sow-a1-m2-cB_1sow-a1-m1-cB, 1sow-a1-m2-cB_1sow-a1-m2-cA
18 1sow-a1-m1-cB 323 64 0.2429 0.0526 0.2656 8.5 1sow-a1-m2-cB_1sow-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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