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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
MFQDPQERPRKLPQLCTELQTTIHDIILECVYCKQQLLRREVYDFAFRDLCIVYRDGNPY
AVCDKCLKFY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7uaj-a1-m1-cC 509 70 1.0000 0.1375 1.0000 5.95e-50 7uaj-a1-m1-cC_7uaj-a1-m1-cD
2 2ljy-a1-m1-cB 70 70 1.0000 1.0000 1.0000 2.91e-47 2ljy-a1-m1-cA_2ljy-a1-m1-cB
3 2ljy-a1-m1-cA 70 70 1.0000 1.0000 1.0000 2.91e-47 2ljy-a1-m1-cA_2ljy-a1-m1-cB
4 7uaj-a1-m1-cD 509 64 0.9143 0.1257 1.0000 1.37e-44 7uaj-a1-m1-cC_7uaj-a1-m1-cD
5 6sjv-a1-m2-cA 529 69 0.5571 0.0737 0.5652 4.20e-24 6sjv-a1-m1-cA_6sjv-a1-m2-cA
6 6sjv-a1-m1-cA 529 69 0.5571 0.0737 0.5652 4.20e-24 6sjv-a1-m1-cA_6sjv-a1-m2-cA
7 8glv-a1-m1-cFa 4484 23 0.1429 0.0022 0.4348 2.4 8glv-a1-m1-cAX_8glv-a1-m1-cFa
8 8glv-a1-m1-cAX 4484 23 0.1429 0.0022 0.4348 2.4 8glv-a1-m1-cAX_8glv-a1-m1-cFa
9 6rla-a1-m1-cB 2750 36 0.1286 0.0033 0.2500 5.3 6rla-a1-m1-cA_6rla-a1-m1-cB
10 6rla-a1-m1-cA 2750 36 0.1286 0.0033 0.2500 5.3 6rla-a1-m1-cA_6rla-a1-m1-cB
11 2x2n-a2-m1-cA 448 53 0.2000 0.0312 0.2642 8.7 2x2n-a2-m1-cC_2x2n-a2-m1-cA
12 4es1-a1-m2-cA 95 58 0.2286 0.1684 0.2759 9.4 4es1-a1-m1-cA_4es1-a1-m2-cA
13 4es1-a1-m1-cA 95 58 0.2286 0.1684 0.2759 9.4 4es1-a1-m1-cA_4es1-a1-m2-cA
14 4gni-a3-m1-cB 384 20 0.1286 0.0234 0.4500 9.8 4gni-a3-m1-cB_4gni-a3-m1-cA
15 4gni-a3-m1-cA 385 20 0.1286 0.0234 0.4500 9.8 4gni-a3-m1-cB_4gni-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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