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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS
FDLMKETLRITNLGDLKVGDWVNVERA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pkv-a1-m1-cB 87 87 1.0000 1.0000 1.0000 7.13e-61 1pkv-a1-m1-cA_1pkv-a1-m1-cB
2 1pkv-a1-m1-cA 87 87 1.0000 1.0000 1.0000 7.13e-61 1pkv-a1-m1-cA_1pkv-a1-m1-cB
3 1i8d-a1-m1-cC 185 87 1.0000 0.4703 1.0000 1.86e-60 1i8d-a1-m1-cC_1i8d-a1-m1-cA, 1i8d-a1-m1-cC_1i8d-a1-m1-cB
4 1i8d-a1-m1-cC 185 41 0.1954 0.0919 0.4146 0.076 1i8d-a1-m1-cC_1i8d-a1-m1-cA, 1i8d-a1-m1-cC_1i8d-a1-m1-cB
5 1i8d-a1-m1-cB 201 87 1.0000 0.4328 1.0000 2.30e-60 1i8d-a1-m1-cC_1i8d-a1-m1-cB
6 1i8d-a1-m1-cB 201 85 0.2759 0.1194 0.2824 0.008 1i8d-a1-m1-cC_1i8d-a1-m1-cB
7 1i8d-a1-m1-cA 206 87 1.0000 0.4223 1.0000 2.47e-60 1i8d-a1-m1-cC_1i8d-a1-m1-cA
8 1i8d-a1-m1-cA 206 86 0.2759 0.1165 0.2791 0.019 1i8d-a1-m1-cC_1i8d-a1-m1-cA
9 7wuo-a1-m1-cC 201 89 0.4368 0.1891 0.4270 9.71e-13 7wuo-a1-m1-cA_7wuo-a1-m1-cC, 7wuo-a1-m1-cB_7wuo-a1-m1-cC
10 7wuo-a1-m1-cC 201 74 0.2184 0.0945 0.2568 9.8 7wuo-a1-m1-cA_7wuo-a1-m1-cC, 7wuo-a1-m1-cB_7wuo-a1-m1-cC
11 7wuo-a1-m1-cB 201 89 0.4368 0.1891 0.4270 9.71e-13 7wuo-a1-m1-cB_7wuo-a1-m1-cC
12 7wuo-a1-m1-cB 201 74 0.2184 0.0945 0.2568 9.8 7wuo-a1-m1-cB_7wuo-a1-m1-cC
13 7wuo-a1-m1-cA 201 89 0.4368 0.1891 0.4270 9.71e-13 7wuo-a1-m1-cA_7wuo-a1-m1-cC
14 7wuo-a1-m1-cA 201 74 0.2184 0.0945 0.2568 9.8 7wuo-a1-m1-cA_7wuo-a1-m1-cC
15 3md7-a1-m2-cA 270 29 0.1264 0.0407 0.3793 1.0 3md7-a1-m1-cA_3md7-a1-m2-cA
16 3md7-a1-m1-cA 270 29 0.1264 0.0407 0.3793 1.0 3md7-a1-m1-cA_3md7-a1-m2-cA
17 1jrk-a3-m1-cA 148 27 0.1379 0.0811 0.4444 2.0 1jrk-a3-m1-cB_1jrk-a3-m1-cA
18 1jrk-a3-m1-cB 147 27 0.1379 0.0816 0.4444 2.1 1jrk-a3-m1-cB_1jrk-a3-m1-cA, 1jrk-a3-m1-cB_1jrk-a3-m1-cD
19 1jrk-a3-m1-cD 150 27 0.1379 0.0800 0.4444 2.1 1jrk-a3-m1-cB_1jrk-a3-m1-cD
20 3tw4-a1-m1-cA 218 56 0.1724 0.0688 0.2679 3.2 3tw4-a1-m1-cB_3tw4-a1-m1-cA
21 6jko-a1-m2-cC 376 27 0.1379 0.0319 0.4444 4.3 6jko-a1-m1-cA_6jko-a1-m2-cC
22 6jko-a1-m1-cA 376 27 0.1379 0.0319 0.4444 4.3 6jko-a1-m1-cA_6jko-a1-m2-cC

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Reference:
Jacob Schwartz et al.

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