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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
MFVFEDILKLDDRSIQLVLREVDTRDLALALKGASDELKEKIFKNMSKRAAALLKDELEY
MGPVRLKDVEEAQQKIINIIRRLEEAGEI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qc7-a1-m1-cB 89 89 1.0000 1.0000 1.0000 1.24e-57 1qc7-a1-m1-cB_1qc7-a1-m1-cA
2 1qc7-a1-m1-cA 101 89 1.0000 0.8812 1.0000 1.64e-57 1qc7-a1-m1-cB_1qc7-a1-m1-cA
3 1lkv-a2-m4-cX 213 89 1.0000 0.4178 1.0000 9.39e-57 1lkv-a2-m1-cX_1lkv-a2-m4-cX, 1lkv-a2-m2-cX_1lkv-a2-m4-cX, 1lkv-a2-m3-cX_1lkv-a2-m4-cX
4 1lkv-a2-m3-cX 213 89 1.0000 0.4178 1.0000 9.39e-57 1lkv-a2-m3-cX_1lkv-a2-m4-cX
5 1lkv-a2-m2-cX 213 89 1.0000 0.4178 1.0000 9.39e-57 1lkv-a2-m2-cX_1lkv-a2-m4-cX
6 1lkv-a2-m1-cX 213 89 1.0000 0.4178 1.0000 9.39e-57 1lkv-a2-m1-cX_1lkv-a2-m4-cX
7 3usy-a4-m3-cB 226 89 0.4831 0.1903 0.4831 4.91e-23 3usy-a4-m1-cB_3usy-a4-m3-cB
8 3usy-a4-m1-cB 226 89 0.4831 0.1903 0.4831 4.91e-23 3usy-a4-m1-cB_3usy-a4-m3-cB
9 6rla-a1-m1-cB 2750 67 0.2360 0.0076 0.3134 0.86 6rla-a1-m1-cA_6rla-a1-m1-cB
10 6rla-a1-m1-cA 2750 67 0.2360 0.0076 0.3134 0.86 6rla-a1-m1-cA_6rla-a1-m1-cB
11 4zg5-a1-m1-cD 252 34 0.1573 0.0556 0.4118 8.3 4zg5-a1-m1-cG_4zg5-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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