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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
MGEITIKLPDSVKVSTNSILYKCGAKDLSVTYYNAGDISLAKLELEDETVVASNVISGSG
AKYAGSVYIWWTKGKTASLYNLIDNPEEDKPISCVEQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4mis-a1-m1-cA 98 97 1.0000 0.9898 1.0000 2.12e-66 4mis-a1-m1-cB_4mis-a1-m1-cA
2 4mis-a1-m1-cB 97 97 1.0000 1.0000 1.0000 2.50e-66 4mis-a1-m1-cB_4mis-a1-m1-cA
3 3f6z-a1-m1-cD 93 77 0.4124 0.4301 0.5195 9.76e-19 3f6z-a1-m1-cB_3f6z-a1-m1-cD
4 3f6z-a1-m1-cB 93 77 0.4124 0.4301 0.5195 9.76e-19 3f6z-a1-m1-cB_3f6z-a1-m1-cD
5 1zjc-a1-m2-cA 413 30 0.1340 0.0315 0.4333 1.5 1zjc-a1-m1-cA_1zjc-a1-m2-cA
6 1zjc-a1-m1-cA 413 30 0.1340 0.0315 0.4333 1.5 1zjc-a1-m1-cA_1zjc-a1-m2-cA
7 4r01-a1-m2-cB 210 49 0.1649 0.0762 0.3265 2.1 4r01-a1-m1-cA_4r01-a1-m2-cB, 4r01-a1-m1-cB_4r01-a1-m2-cB, 4r01-a1-m2-cA_4r01-a1-m2-cB
8 4r01-a1-m2-cA 210 49 0.1649 0.0762 0.3265 2.1 4r01-a1-m1-cA_4r01-a1-m2-cA, 4r01-a1-m2-cA_4r01-a1-m2-cB
9 4r01-a1-m1-cB 210 49 0.1649 0.0762 0.3265 2.1 4r01-a1-m1-cB_4r01-a1-m2-cB
10 4r01-a1-m1-cA 210 49 0.1649 0.0762 0.3265 2.1 4r01-a1-m1-cA_4r01-a1-m2-cA, 4r01-a1-m1-cA_4r01-a1-m2-cB
11 2q3m-a1-m2-cA 284 54 0.1856 0.0634 0.3333 3.2 2q3m-a1-m1-cA_2q3m-a1-m2-cA
12 2q3m-a1-m1-cA 284 54 0.1856 0.0634 0.3333 3.2 2q3m-a1-m1-cA_2q3m-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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