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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
MGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALL
A

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2o8x-a3-m7-cC 61 61 1.0000 1.0000 1.0000 6.97e-38 2o8x-a3-m1-cB_2o8x-a3-m7-cC, 2o8x-a3-m7-cB_2o8x-a3-m7-cC
2 2o8x-a3-m7-cB 61 61 1.0000 1.0000 1.0000 6.97e-38 2o8x-a3-m7-cB_2o8x-a3-m7-cC
3 2o8x-a3-m1-cB 61 61 1.0000 1.0000 1.0000 6.97e-38 2o8x-a3-m1-cB_2o8x-a3-m7-cC
4 2o8x-a2-m9-cC 61 61 1.0000 1.0000 1.0000 6.97e-38 2o8x-a2-m11-cA_2o8x-a2-m9-cC, 2o8x-a2-m11-cC_2o8x-a2-m9-cC
5 2o8x-a2-m11-cC 61 61 1.0000 1.0000 1.0000 6.97e-38 2o8x-a2-m11-cC_2o8x-a2-m9-cC
6 2o8x-a2-m11-cA 61 61 1.0000 1.0000 1.0000 6.97e-38 2o8x-a2-m11-cA_2o8x-a2-m9-cC
7 1or7-a3-m1-cB 164 51 0.4262 0.1585 0.5098 2.10e-10 1or7-a3-m1-cB_1or7-a3-m1-cA
8 1or7-a3-m1-cA 181 51 0.4262 0.1436 0.5098 3.08e-10 1or7-a3-m1-cB_1or7-a3-m1-cA
9 3vfz-a3-m1-cA 61 51 0.2951 0.2951 0.3529 0.057 3vfz-a3-m1-cA_3vfz-a3-m1-cB
10 3vfz-a3-m1-cB 62 51 0.2951 0.2903 0.3529 0.059 3vfz-a3-m1-cA_3vfz-a3-m1-cB
11 5xe7-a4-m2-cB 275 56 0.2787 0.0618 0.3036 1.0 5xe7-a4-m1-cB_5xe7-a4-m2-cB
12 5xe7-a4-m1-cB 275 56 0.2787 0.0618 0.3036 1.0 5xe7-a4-m1-cB_5xe7-a4-m2-cB
13 2h5g-a3-m3-cB 419 34 0.2131 0.0310 0.3824 4.2 2h5g-a3-m1-cB_2h5g-a3-m3-cB
14 2h5g-a3-m1-cB 419 34 0.2131 0.0310 0.3824 4.2 2h5g-a3-m1-cB_2h5g-a3-m3-cB
15 3t0y-a1-m1-cA 124 28 0.1803 0.0887 0.3929 5.7 3t0y-a1-m1-cA_3t0y-a1-m1-cC
16 5wch-a1-m1-cD 330 44 0.2295 0.0424 0.3182 5.8 5wch-a1-m1-cD_5wch-a1-m1-cA, 5wch-a1-m1-cD_5wch-a1-m1-cC
17 5wch-a1-m1-cC 342 44 0.2295 0.0409 0.3182 5.8 5wch-a1-m1-cD_5wch-a1-m1-cC
18 5wch-a1-m1-cA 350 44 0.2295 0.0400 0.3182 5.8 5wch-a1-m1-cD_5wch-a1-m1-cA
19 3t0y-a1-m1-cC 126 28 0.1803 0.0873 0.3929 5.9 3t0y-a1-m1-cA_3t0y-a1-m1-cC
20 7yxx-a1-m1-cC 1741 44 0.2295 0.0080 0.3182 6.1 7yxx-a1-m1-cC_7yxx-a1-m1-cA, 7yxx-a1-m1-cC_7yxx-a1-m1-cB
21 7yxx-a1-m1-cB 1754 44 0.2295 0.0080 0.3182 6.1 7yxx-a1-m1-cC_7yxx-a1-m1-cB
22 7yxx-a1-m1-cA 1754 44 0.2295 0.0080 0.3182 6.1 7yxx-a1-m1-cC_7yxx-a1-m1-cA
23 3hug-a6-m1-cK 71 47 0.2459 0.2113 0.3191 7.1 3hug-a6-m1-cK_3hug-a6-m1-cM
24 3hug-a6-m1-cM 74 47 0.2459 0.2027 0.3191 8.1 3hug-a6-m1-cK_3hug-a6-m1-cM
25 3hug-a6-m1-cC 77 47 0.2459 0.1948 0.3191 8.5 3hug-a6-m1-cC_3hug-a6-m1-cA
26 3hug-a6-m1-cA 80 47 0.2459 0.1875 0.3191 9.8 3hug-a6-m1-cC_3hug-a6-m1-cA

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Reference:
Jacob Schwartz et al.

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