Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=89)
MGFTDETVRFDFDDNRKKAISETLETVYRALEEKGYNPINQIVGYLLSGDPAYIPRYQDA
RNLIRRHERDEIMEELTKYYLANHGIDIK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5us5-a1-m1-cB 89 89 1.0000 1.0000 1.0000 2.22e-62 5us5-a1-m1-cA_5us5-a1-m1-cB
2 5us5-a1-m1-cA 89 89 1.0000 1.0000 1.0000 2.22e-62 5us5-a1-m1-cA_5us5-a1-m1-cB
3 7y86-a1-m1-cB 83 83 0.6742 0.7229 0.7229 1.21e-40 7y86-a1-m1-cA_7y86-a1-m1-cB
4 7y86-a1-m1-cA 81 81 0.6629 0.7284 0.7284 3.76e-40 7y86-a1-m1-cA_7y86-a1-m1-cB
5 6tif-a1-m1-cB 87 83 0.5843 0.5977 0.6265 3.27e-32 6tif-a1-m1-cA_6tif-a1-m1-cB
6 6tif-a1-m1-cA 84 83 0.5843 0.6190 0.6265 3.91e-32 6tif-a1-m1-cA_6tif-a1-m1-cB
7 3zw6-a1-m1-cF 263 48 0.2135 0.0722 0.3958 0.17 3zw6-a1-m1-cE_3zw6-a1-m1-cF
8 3zw6-a1-m1-cE 263 48 0.2135 0.0722 0.3958 0.17 3zw6-a1-m1-cE_3zw6-a1-m1-cF
9 5tky-a1-m1-cB 591 56 0.2135 0.0321 0.3393 0.34 5tky-a1-m1-cB_5tky-a1-m1-cA
10 5tky-a1-m1-cA 597 56 0.2135 0.0318 0.3393 0.35 5tky-a1-m1-cB_5tky-a1-m1-cA
11 5tf0-a1-m1-cB 706 53 0.2135 0.0269 0.3585 0.50 5tf0-a1-m1-cA_5tf0-a1-m1-cB
12 5tf0-a1-m1-cA 706 53 0.2135 0.0269 0.3585 0.50 5tf0-a1-m1-cA_5tf0-a1-m1-cB
13 6s8f-a1-m1-cH 2571 39 0.1348 0.0047 0.3077 2.9 6s8f-a1-m1-cF_6s8f-a1-m1-cH
14 6s8f-a1-m1-cF 2571 39 0.1348 0.0047 0.3077 2.9 6s8f-a1-m1-cF_6s8f-a1-m1-cH
15 5ai7-a1-m1-cM 318 33 0.1124 0.0314 0.3030 3.3 5ai7-a1-m1-cK_5ai7-a1-m1-cM
16 5ai7-a1-m1-cK 318 33 0.1124 0.0314 0.3030 3.3 5ai7-a1-m1-cK_5ai7-a1-m1-cM
17 5ai7-a1-m1-cH 318 33 0.1124 0.0314 0.3030 3.3 5ai7-a1-m1-cE_5ai7-a1-m1-cH
18 5ai7-a1-m1-cE 318 33 0.1124 0.0314 0.3030 3.3 5ai7-a1-m1-cE_5ai7-a1-m1-cH
19 3iku-a1-m1-cL 316 33 0.1124 0.0316 0.3030 3.4 3iku-a1-m1-cK_3iku-a1-m1-cL
20 3iku-a1-m1-cK 316 33 0.1124 0.0316 0.3030 3.4 3iku-a1-m1-cK_3iku-a1-m1-cL
21 3iky-a1-m1-cL 320 33 0.1124 0.0312 0.3030 3.5 3iky-a1-m1-cK_3iky-a1-m1-cL
22 3iky-a1-m1-cK 320 33 0.1124 0.0312 0.3030 3.5 3iky-a1-m1-cK_3iky-a1-m1-cL
23 2zgy-a1-m1-cB 320 33 0.1124 0.0312 0.3030 3.5 2zgy-a1-m1-cA_2zgy-a1-m1-cB
24 2zgy-a1-m1-cA 320 33 0.1124 0.0312 0.3030 3.5 2zgy-a1-m1-cA_2zgy-a1-m1-cB
25 2qu4-a1-m9-cA 320 33 0.1124 0.0312 0.3030 3.5 2qu4-a1-m7-cA_2qu4-a1-m9-cA, 2qu4-a1-m8-cA_2qu4-a1-m9-cA
26 2qu4-a1-m8-cA 320 33 0.1124 0.0312 0.3030 3.5 2qu4-a1-m8-cA_2qu4-a1-m9-cA
27 2qu4-a1-m7-cA 320 33 0.1124 0.0312 0.3030 3.5 2qu4-a1-m7-cA_2qu4-a1-m9-cA
28 4z0y-a3-m1-cD 346 51 0.1798 0.0462 0.3137 3.8 4z0y-a3-m1-cB_4z0y-a3-m1-cD
29 4z0y-a3-m1-cB 346 51 0.1798 0.0462 0.3137 3.8 4z0y-a3-m1-cB_4z0y-a3-m1-cD
30 6jzo-a1-m1-cD 663 23 0.1236 0.0166 0.4783 4.6 6jzo-a1-m1-cC_6jzo-a1-m1-cD
31 6jzo-a1-m1-cC 663 23 0.1236 0.0166 0.4783 4.6 6jzo-a1-m1-cC_6jzo-a1-m1-cD
32 1m46-a2-m2-cA 148 42 0.1685 0.1014 0.3571 5.5 1m46-a2-m1-cA_1m46-a2-m2-cA
33 1m46-a2-m1-cA 148 42 0.1685 0.1014 0.3571 5.5 1m46-a2-m1-cA_1m46-a2-m2-cA
34 4c2k-a2-m1-cC 394 24 0.1124 0.0254 0.4167 6.3 4c2k-a2-m1-cC_4c2k-a2-m1-cD
35 4c2k-a2-m1-cD 399 24 0.1124 0.0251 0.4167 6.3 4c2k-a2-m1-cC_4c2k-a2-m1-cD
36 3ss6-a2-m1-cB 391 21 0.1236 0.0281 0.5238 7.3 3ss6-a2-m1-cB_3ss6-a2-m1-cA
37 3ss6-a1-m2-cB 391 21 0.1236 0.0281 0.5238 7.3 3ss6-a1-m1-cB_3ss6-a1-m2-cB, 3ss6-a1-m2-cB_3ss6-a1-m1-cA
38 3ss6-a1-m1-cB 391 21 0.1236 0.0281 0.5238 7.3 3ss6-a1-m1-cB_3ss6-a1-m2-cB
39 3ss6-a2-m1-cA 393 21 0.1236 0.0280 0.5238 7.3 3ss6-a2-m1-cB_3ss6-a2-m1-cA
40 3ss6-a1-m1-cA 393 21 0.1236 0.0280 0.5238 7.3 3ss6-a1-m2-cB_3ss6-a1-m1-cA
41 6qla-a1-m1-cB 319 35 0.1685 0.0470 0.4286 7.4 6qla-a1-m1-cA_6qla-a1-m1-cB
42 6qla-a1-m1-cA 319 35 0.1685 0.0470 0.4286 7.4 6qla-a1-m1-cA_6qla-a1-m1-cB
43 3sal-a2-m7-cB 394 18 0.1124 0.0254 0.5556 8.4 3sal-a2-m7-cB_3sal-a2-m5-cB
44 3sal-a2-m5-cB 394 18 0.1124 0.0254 0.5556 8.4 3sal-a2-m7-cB_3sal-a2-m5-cB
45 2xgu-a1-m1-cB 134 35 0.1573 0.1045 0.4000 8.7 2xgu-a1-m1-cB_2xgu-a1-m1-cA
46 2xgu-a1-m1-cA 143 35 0.1573 0.0979 0.4000 8.7 2xgu-a1-m1-cB_2xgu-a1-m1-cA
47 7x4t-a2-m1-cA 298 33 0.1461 0.0436 0.3939 9.6 7x4t-a2-m1-cB_7x4t-a2-m1-cA
48 1vsv-a5-m1-cC 338 29 0.1124 0.0296 0.3448 9.7 1vsv-a5-m1-cB_1vsv-a5-m1-cC
49 1vsv-a5-m1-cB 338 29 0.1124 0.0296 0.3448 9.7 1vsv-a5-m1-cB_1vsv-a5-m1-cC
50 1vsv-a2-m1-cB 338 29 0.1124 0.0296 0.3448 9.7 1vsv-a2-m1-cA_1vsv-a2-m1-cB
51 1vsv-a2-m1-cA 338 29 0.1124 0.0296 0.3448 9.7 1vsv-a2-m1-cA_1vsv-a2-m1-cB
52 1vsv-a1-m1-cD 338 29 0.1124 0.0296 0.3448 9.7 1vsv-a1-m1-cB_1vsv-a1-m1-cD
53 1vsv-a1-m1-cB 338 29 0.1124 0.0296 0.3448 9.7 1vsv-a1-m1-cB_1vsv-a1-m1-cD
54 6yq9-a3-m1-cBBB 476 27 0.1348 0.0252 0.4444 10.0 6yq9-a3-m1-cAAA_6yq9-a3-m1-cBBB
55 6yq9-a3-m1-cAAA 476 27 0.1348 0.0252 0.4444 10.0 6yq9-a3-m1-cAAA_6yq9-a3-m1-cBBB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600