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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
MGHHHHHHSHMGGGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVID
YILDLQVV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2lfh-a1-m1-cB 68 68 1.0000 1.0000 1.0000 4.27e-45 2lfh-a1-m1-cA_2lfh-a1-m1-cB
2 2lfh-a1-m1-cA 68 68 1.0000 1.0000 1.0000 4.27e-45 2lfh-a1-m1-cA_2lfh-a1-m1-cB
3 4aya-a1-m1-cA 59 48 0.4265 0.4915 0.6042 8.75e-18 4aya-a1-m1-cB_4aya-a1-m1-cA
4 4aya-a1-m1-cB 48 43 0.3971 0.5625 0.6279 1.95e-15 4aya-a1-m1-cB_4aya-a1-m1-cA
5 6u2u-a1-m1-cA 46 42 0.4118 0.6087 0.6667 7.03e-14 6u2u-a1-m1-cB_6u2u-a1-m1-cA
6 6u2u-a1-m1-cB 44 42 0.4118 0.6364 0.6667 7.87e-14 6u2u-a1-m1-cB_6u2u-a1-m1-cA
7 2ql2-a3-m1-cB 59 40 0.1765 0.2034 0.3000 0.30 2ql2-a3-m1-cD_2ql2-a3-m1-cB
8 2ql2-a3-m1-cD 57 40 0.1765 0.2105 0.3000 0.34 2ql2-a3-m1-cD_2ql2-a3-m1-cB
9 7eod-a2-m1-cC 66 36 0.1618 0.1667 0.3056 3.4 7eod-a2-m1-cC_7eod-a2-m1-cD
10 5i4z-a1-m1-cB 74 41 0.1471 0.1351 0.2439 3.7 5i4z-a1-m1-cA_5i4z-a1-m1-cB
11 5i4z-a1-m1-cA 74 41 0.1471 0.1351 0.2439 3.7 5i4z-a1-m1-cA_5i4z-a1-m1-cB
12 4l6y-a1-m1-cB 432 52 0.2206 0.0347 0.2885 3.8 4l6y-a1-m1-cB_4l6y-a1-m1-cA
13 4l6y-a1-m1-cA 445 52 0.2206 0.0337 0.2885 4.1 4l6y-a1-m1-cB_4l6y-a1-m1-cA
14 2q2k-a1-m2-cA 45 39 0.1912 0.2889 0.3333 5.4 2q2k-a1-m1-cA_2q2k-a1-m2-cA, 2q2k-a1-m2-cB_2q2k-a1-m2-cA
15 2q2k-a1-m1-cA 45 39 0.1912 0.2889 0.3333 5.4 2q2k-a1-m1-cA_2q2k-a1-m2-cA
16 2q2k-a1-m2-cB 44 39 0.1912 0.2955 0.3333 6.0 2q2k-a1-m2-cB_2q2k-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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