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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
MGPLQYKDLKIDIKTSPPPECINDLLQAVDSQEVRDYCEKKGWIVNITSQVQTERNINRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ng7-a1-m1-cB 60 60 1.0000 1.0000 1.0000 3.64e-40 1ng7-a1-m1-cA_1ng7-a1-m1-cB
2 1ng7-a1-m1-cA 60 60 1.0000 1.0000 1.0000 3.64e-40 1ng7-a1-m1-cA_1ng7-a1-m1-cB
3 6q69-a1-m1-cD 43 42 0.4000 0.5581 0.5714 4.06e-11 6q69-a1-m1-cB_6q69-a1-m1-cD
4 6q69-a1-m1-cB 43 42 0.4000 0.5581 0.5714 4.06e-11 6q69-a1-m1-cB_6q69-a1-m1-cD
5 6q68-a1-m1-cD 42 43 0.4167 0.5952 0.5814 1.23e-09 6q68-a1-m1-cB_6q68-a1-m1-cD
6 6q68-a1-m1-cB 42 43 0.4167 0.5952 0.5814 1.23e-09 6q68-a1-m1-cB_6q68-a1-m1-cD
7 5jjv-a1-m2-cB 356 21 0.1500 0.0253 0.4286 4.6 5jjv-a1-m1-cA_5jjv-a1-m2-cB, 5jjv-a1-m2-cA_5jjv-a1-m2-cB
8 5jjv-a1-m2-cA 353 21 0.1500 0.0255 0.4286 4.7 5jjv-a1-m2-cA_5jjv-a1-m2-cB
9 5jjv-a1-m1-cA 353 21 0.1500 0.0255 0.4286 4.7 5jjv-a1-m1-cA_5jjv-a1-m2-cB
10 4s3p-a6-m2-cA 691 17 0.1500 0.0130 0.5294 5.4 4s3p-a6-m2-cB_4s3p-a6-m2-cA
11 4s3p-a6-m1-cA 691 17 0.1500 0.0130 0.5294 5.4 4s3p-a6-m2-cB_4s3p-a6-m1-cA
12 4s3p-a6-m2-cB 689 17 0.1500 0.0131 0.5294 5.5 4s3p-a6-m1-cB_4s3p-a6-m2-cB, 4s3p-a6-m2-cB_4s3p-a6-m1-cA, 4s3p-a6-m2-cB_4s3p-a6-m2-cA
13 4s3p-a6-m1-cB 689 17 0.1500 0.0131 0.5294 5.5 4s3p-a6-m1-cB_4s3p-a6-m2-cB

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Reference:
Jacob Schwartz et al.

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