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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
MGRVEVRVEFEGDKMRVRLRNDSSTPVEVHIKVGDEKRTVTVNPGEEVEVTFSANDPHKF
NRPQFTIEWG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7skp-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.50e-46 7skp-a1-m1-cA_7skp-a1-m1-cB
2 7skp-a1-m1-cB 76 70 1.0000 0.9211 1.0000 1.81e-46 7skp-a1-m1-cA_7skp-a1-m1-cB
3 7sko-a1-m1-cA 72 68 0.4143 0.4028 0.4265 2.41e-09 7sko-a1-m1-cD_7sko-a1-m1-cA
4 7sko-a1-m1-cD 71 68 0.4143 0.4085 0.4265 2.43e-09 7sko-a1-m1-cD_7sko-a1-m1-cA
5 6rwa-a1-m1-cE 2361 30 0.1429 0.0042 0.3333 1.6 6rwa-a1-m1-cC_6rwa-a1-m1-cE, 6rwa-a1-m1-cD_6rwa-a1-m1-cE
6 6rwa-a1-m1-cD 2361 30 0.1429 0.0042 0.3333 1.6 6rwa-a1-m1-cD_6rwa-a1-m1-cE
7 6rwa-a1-m1-cC 2361 30 0.1429 0.0042 0.3333 1.6 6rwa-a1-m1-cC_6rwa-a1-m1-cE
8 2zbu-a3-m3-cC 259 30 0.1286 0.0347 0.3000 1.8 2zbu-a3-m2-cC_2zbu-a3-m3-cC
9 2zbu-a3-m2-cC 259 30 0.1286 0.0347 0.3000 1.8 2zbu-a3-m2-cC_2zbu-a3-m3-cC
10 6hbe-a1-m1-cC 427 53 0.2429 0.0398 0.3208 2.6 6hbe-a1-m1-cB_6hbe-a1-m1-cC
11 6hbe-a1-m1-cB 425 53 0.2429 0.0400 0.3208 2.6 6hbe-a1-m1-cB_6hbe-a1-m1-cC
12 4bof-a5-m1-cD 409 27 0.1286 0.0220 0.3333 3.6 4bof-a5-m3-cE_4bof-a5-m1-cD
13 4w8j-a1-m2-cA 1017 38 0.1714 0.0118 0.3158 5.6 4w8j-a1-m1-cA_4w8j-a1-m2-cA
14 4w8j-a1-m1-cA 1017 38 0.1714 0.0118 0.3158 5.6 4w8j-a1-m1-cA_4w8j-a1-m2-cA
15 2go3-a3-m2-cB 266 40 0.2000 0.0526 0.3500 5.8 2go3-a3-m1-cA_2go3-a3-m2-cB
16 2go3-a3-m1-cA 266 40 0.2000 0.0526 0.3500 5.8 2go3-a3-m1-cA_2go3-a3-m2-cB
17 2o3z-a1-m1-cB 267 40 0.2000 0.0524 0.3500 5.9 2o3z-a1-m1-cA_2o3z-a1-m1-cB
18 2o3z-a1-m1-cA 267 40 0.2000 0.0524 0.3500 5.9 2o3z-a1-m1-cA_2o3z-a1-m1-cB
19 8huy-a1-m1-cA 730 21 0.1286 0.0123 0.4286 6.2 8huy-a1-m1-cB_8huy-a1-m1-cA
20 5xev-a1-m2-cA 409 34 0.1714 0.0293 0.3529 6.3 5xev-a1-m1-cA_5xev-a1-m2-cA
21 5xev-a1-m1-cA 409 34 0.1714 0.0293 0.3529 6.3 5xev-a1-m1-cA_5xev-a1-m2-cA
22 8huy-a1-m1-cB 727 21 0.1286 0.0124 0.4286 6.4 8huy-a1-m1-cB_8huy-a1-m1-cA
23 3kop-a1-m1-cC 162 47 0.2286 0.0988 0.3404 9.9 3kop-a1-m1-cC_3kop-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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