Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MGSSHHHHHHSSGRENLYFQGMTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCG
ASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2js3-a1-m1-cB 96 96 1.0000 1.0000 1.0000 1.56e-68 2js3-a1-m1-cA_2js3-a1-m1-cB
2 2js3-a1-m1-cA 96 96 1.0000 1.0000 1.0000 1.56e-68 2js3-a1-m1-cA_2js3-a1-m1-cB
3 2hrz-a1-m2-cA 335 34 0.2083 0.0597 0.5882 4.71e-04 2hrz-a1-m1-cA_2hrz-a1-m2-cA
4 2hrz-a1-m1-cA 335 34 0.2083 0.0597 0.5882 4.71e-04 2hrz-a1-m1-cA_2hrz-a1-m2-cA
5 4b9d-a1-m1-cB 295 45 0.2083 0.0678 0.4444 0.004 4b9d-a1-m1-cA_4b9d-a1-m1-cB
6 2iai-a1-m2-cA 196 52 0.2083 0.1020 0.3846 0.054 2iai-a1-m1-cA_2iai-a1-m2-cA
7 2iai-a1-m1-cA 196 52 0.2083 0.1020 0.3846 0.054 2iai-a1-m1-cA_2iai-a1-m2-cA
8 3q5l-a2-m1-cC 216 14 0.1250 0.0556 0.8571 0.093 3q5l-a2-m3-cD_3q5l-a2-m1-cC
9 2gfq-a1-m1-cA 279 12 0.1250 0.0430 1.0000 0.11 2gfq-a1-m1-cB_2gfq-a1-m1-cA
10 5k1s-a2-m1-cC 358 16 0.1250 0.0335 0.7500 0.26 5k1s-a2-m1-cD_5k1s-a2-m1-cC
11 4b9d-a1-m1-cA 290 44 0.1979 0.0655 0.4318 0.32 4b9d-a1-m1-cA_4b9d-a1-m1-cB
12 3gyd-a1-m1-cB 174 19 0.1354 0.0747 0.6842 0.36 3gyd-a1-m1-cA_3gyd-a1-m1-cB
13 2aua-a1-m1-cB 205 23 0.1458 0.0683 0.6087 0.47 2aua-a1-m1-cA_2aua-a1-m1-cB
14 2nvw-a3-m3-cB 405 24 0.1354 0.0321 0.5417 0.51 2nvw-a3-m1-cB_2nvw-a3-m3-cB, 2nvw-a3-m3-cB_2nvw-a3-m3-cA
15 2nvw-a3-m1-cB 405 24 0.1354 0.0321 0.5417 0.51 2nvw-a3-m1-cB_2nvw-a3-m3-cB
16 3drw-a1-m1-cA 460 11 0.1146 0.0239 1.0000 0.52 3drw-a1-m1-cB_3drw-a1-m1-cA
17 4ok7-a1-m1-cC 223 14 0.1354 0.0583 0.9286 0.59 4ok7-a1-m1-cA_4ok7-a1-m1-cC, 4ok7-a1-m1-cB_4ok7-a1-m1-cC
18 4ok7-a1-m1-cB 223 14 0.1354 0.0583 0.9286 0.59 4ok7-a1-m1-cB_4ok7-a1-m1-cC
19 4ok7-a1-m1-cA 223 14 0.1354 0.0583 0.9286 0.59 4ok7-a1-m1-cA_4ok7-a1-m1-cC
20 3q5l-a2-m3-cD 215 13 0.1146 0.0512 0.8462 0.67 3q5l-a2-m3-cD_3q5l-a2-m1-cC
21 2rd9-a3-m1-cC 183 42 0.1667 0.0874 0.3810 1.0 2rd9-a3-m1-cC_2rd9-a3-m1-cD
22 2nvw-a3-m3-cA 413 14 0.1250 0.0291 0.8571 1.2 2nvw-a3-m3-cB_2nvw-a3-m3-cA
23 2wb6-a1-m2-cA 114 16 0.0938 0.0789 0.5625 1.3 2wb6-a1-m1-cA_2wb6-a1-m2-cA
24 2wb6-a1-m1-cA 114 16 0.0938 0.0789 0.5625 1.3 2wb6-a1-m1-cA_2wb6-a1-m2-cA
25 2q87-a1-m1-cC 106 34 0.1250 0.1132 0.3529 1.4 2q87-a1-m1-cB_2q87-a1-m1-cC
26 4e38-a1-m1-cC 227 29 0.1146 0.0485 0.3793 1.7 4e38-a1-m1-cB_4e38-a1-m1-cC
27 2ig6-a1-m1-cA 139 35 0.1667 0.1151 0.4571 1.8 2ig6-a1-m1-cB_2ig6-a1-m1-cA
28 7o8c-a1-m1-cB 579 28 0.1458 0.0242 0.5000 2.3 7o8c-a1-m1-cB_7o8c-a1-m1-cA
29 7o8c-a1-m1-cA 582 28 0.1458 0.0241 0.5000 2.3 7o8c-a1-m1-cB_7o8c-a1-m1-cA
30 3n9x-a1-m1-cB 374 17 0.1042 0.0267 0.5882 2.6 3n9x-a1-m1-cA_3n9x-a1-m1-cB
31 3h1n-a1-m1-cB 233 31 0.1354 0.0558 0.4194 2.6 3h1n-a1-m1-cA_3h1n-a1-m1-cB
32 3k92-a1-m1-cE 396 103 0.2917 0.0707 0.2718 3.4 3k92-a1-m1-cE_3k92-a1-m1-cC, 3k92-a1-m1-cE_3k92-a1-m1-cD
33 6iaq-a2-m1-cD 339 40 0.1458 0.0413 0.3500 4.2 6iaq-a2-m1-cB_6iaq-a2-m1-cD
34 4f8q-a1-m2-cA 208 73 0.2396 0.1106 0.3151 4.6 4f8q-a1-m1-cA_4f8q-a1-m2-cA
35 4f8q-a1-m1-cA 208 73 0.2396 0.1106 0.3151 4.6 4f8q-a1-m1-cA_4f8q-a1-m2-cA
36 2fg9-a1-m6-cA 158 25 0.1250 0.0759 0.4800 5.3 2fg9-a1-m3-cA_2fg9-a1-m6-cA, 2fg9-a1-m5-cA_2fg9-a1-m6-cA
37 2fg9-a1-m5-cA 158 25 0.1250 0.0759 0.4800 5.3 2fg9-a1-m5-cA_2fg9-a1-m6-cA
38 2fg9-a1-m3-cA 158 25 0.1250 0.0759 0.4800 5.3 2fg9-a1-m3-cA_2fg9-a1-m6-cA
39 2q87-a1-m1-cB 106 38 0.1354 0.1226 0.3421 5.7 2q87-a1-m1-cB_2q87-a1-m1-cC
40 5eo8-a1-m2-cA 311 39 0.1667 0.0514 0.4103 6.2 5eo8-a1-m1-cA_5eo8-a1-m2-cA
41 5eo8-a1-m1-cA 311 39 0.1667 0.0514 0.4103 6.2 5eo8-a1-m1-cA_5eo8-a1-m2-cA
42 6pnu-a3-m3-cD 482 61 0.2083 0.0415 0.3279 8.5 6pnu-a3-m1-cB_6pnu-a3-m3-cD
43 6pnu-a1-m1-cD 482 61 0.2083 0.0415 0.3279 8.5 6pnu-a1-m1-cD_6pnu-a1-m1-cC
44 4c21-a1-m3-cB 605 8 0.0833 0.0132 1.0000 8.9 4c21-a1-m1-cA_4c21-a1-m3-cB, 4c21-a1-m2-cB_4c21-a1-m3-cB, 4c21-a1-m3-cA_4c21-a1-m3-cB
45 4c21-a1-m2-cB 605 8 0.0833 0.0132 1.0000 8.9 4c21-a1-m2-cB_4c21-a1-m3-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600