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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
MHTTLFFSNRTQAVRLPKSISFPEDVKHVEIIAVGRSRIITPVGESWDSWFDGEGASTDF
MSTREQPA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ifm-a1-m1-cH 68 68 1.0000 1.0000 1.0000 3.65e-46 6ifm-a1-m1-cB_6ifm-a1-m1-cH
2 6ifm-a1-m1-cB 68 68 1.0000 1.0000 1.0000 3.65e-46 6ifm-a1-m1-cB_6ifm-a1-m1-cH
3 6sd6-a1-m2-cB 67 67 0.6765 0.6866 0.6866 9.19e-33 6sd6-a1-m2-cB_6sd6-a1-m1-cA
4 6sd6-a1-m1-cA 68 68 0.6765 0.6765 0.6765 1.01e-32 6sd6-a1-m2-cB_6sd6-a1-m1-cA
5 3zvk-a1-m1-cH 57 51 0.2647 0.3158 0.3529 4.88e-06 3zvk-a1-m1-cE_3zvk-a1-m1-cH
6 3zvk-a1-m1-cE 57 51 0.2647 0.3158 0.3529 4.99e-06 3zvk-a1-m1-cE_3zvk-a1-m1-cH
7 5l6l-a1-m1-cE 63 62 0.2794 0.3016 0.3065 0.10 5l6l-a1-m1-cE_5l6l-a1-m1-cH
8 5l6l-a1-m1-cH 80 62 0.2794 0.2375 0.3065 0.20 5l6l-a1-m1-cE_5l6l-a1-m1-cH
9 5k8j-a1-m2-cA 79 62 0.2794 0.2405 0.3065 0.22 5k8j-a1-m1-cA_5k8j-a1-m2-cA
10 5k8j-a1-m1-cA 79 62 0.2794 0.2405 0.3065 0.22 5k8j-a1-m1-cA_5k8j-a1-m2-cA
11 8gpw-a1-m1-cB 395 61 0.2647 0.0456 0.2951 2.6 8gpw-a1-m1-cB_8gpw-a1-m1-cA
12 3tgv-a2-m1-cD 142 31 0.1618 0.0775 0.3548 3.8 3tgv-a2-m1-cC_3tgv-a2-m1-cD
13 3tgv-a2-m1-cC 142 31 0.1618 0.0775 0.3548 3.8 3tgv-a2-m1-cC_3tgv-a2-m1-cD
14 3pci-a1-m2-cB 200 60 0.2059 0.0700 0.2333 6.4 3pci-a1-m1-cA_3pci-a1-m2-cB
15 3pci-a1-m1-cA 200 60 0.2059 0.0700 0.2333 6.4 3pci-a1-m1-cA_3pci-a1-m2-cB
16 4ozo-a1-m1-cB 459 30 0.1324 0.0196 0.3000 6.4 4ozo-a1-m1-cA_4ozo-a1-m1-cB
17 4ozo-a1-m1-cA 459 30 0.1324 0.0196 0.3000 6.4 4ozo-a1-m1-cA_4ozo-a1-m1-cB
18 3ia7-a1-m1-cB 382 48 0.2500 0.0445 0.3542 7.2 3ia7-a1-m1-cB_3ia7-a1-m1-cA
19 3ia7-a1-m1-cA 394 48 0.2500 0.0431 0.3542 7.9 3ia7-a1-m1-cB_3ia7-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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