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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
MIEIIRSKEFSLKPMDSEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLIQTS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6t7o-a1-m1-cB 58 58 1.0000 1.0000 1.0000 2.90e-38 6t7o-a1-m1-cB_6t7o-a1-m1-cA
2 6t7o-a1-m1-cA 59 59 1.0000 0.9831 0.9831 2.16e-36 6t7o-a1-m1-cB_6t7o-a1-m1-cA
3 6fxc-a1-m1-cBv 162 57 0.9655 0.3457 0.9825 2.99e-34 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
4 6fxc-a1-m1-cAv 162 57 0.9655 0.3457 0.9825 2.99e-34 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
5 6gzz-a1-m1-cX3 57 55 0.5345 0.5439 0.5636 4.31e-18 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
6 6gzz-a1-m1-cW4 57 55 0.5345 0.5439 0.5636 4.31e-18 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
7 6gzx-a1-m1-cX3 57 55 0.5345 0.5439 0.5636 4.31e-18 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
8 6gzx-a1-m1-cW4 57 55 0.5345 0.5439 0.5636 4.31e-18 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
9 3lyv-a4-m1-cB 56 55 0.5000 0.5179 0.5273 3.29e-15 3lyv-a4-m1-cB_3lyv-a4-m3-cA
10 3lyv-a4-m3-cA 57 55 0.5000 0.5088 0.5273 3.30e-15 3lyv-a4-m1-cB_3lyv-a4-m3-cA
11 3ka5-a1-m1-cA 55 54 0.4310 0.4545 0.4630 6.24e-11 3ka5-a1-m1-cA_3ka5-a1-m1-cB
12 3ka5-a1-m1-cB 57 54 0.4310 0.4386 0.4630 6.68e-11 3ka5-a1-m1-cA_3ka5-a1-m1-cB
13 4s1v-a3-m1-cA 313 24 0.1897 0.0351 0.4583 5.3 4s1v-a3-m1-cA_4s1v-a3-m1-cB
14 4s1v-a1-m1-cD 314 24 0.1897 0.0350 0.4583 5.3 4s1v-a1-m1-cD_4s1v-a1-m1-cB
15 4s1v-a3-m1-cB 315 24 0.1897 0.0349 0.4583 5.3 4s1v-a3-m1-cA_4s1v-a3-m1-cB
16 4s1v-a1-m1-cB 315 24 0.1897 0.0349 0.4583 5.3 4s1v-a1-m1-cD_4s1v-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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