Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=80)
MIGVLLMKSRANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLT
DARKLIEKSRGKLQLVVLRD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3e17-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.41e-52 3e17-a1-m1-cB_3e17-a1-m1-cA
2 3e17-a1-m1-cB 79 79 0.9875 1.0000 1.0000 1.04e-51 3e17-a1-m1-cB_3e17-a1-m1-cA
3 2rcz-a1-m1-cB 81 77 0.6750 0.6667 0.7013 1.06e-35 2rcz-a1-m1-cA_2rcz-a1-m1-cB
4 2rcz-a1-m1-cA 79 76 0.6625 0.6709 0.6974 9.48e-35 2rcz-a1-m1-cA_2rcz-a1-m1-cB
5 6nek-a1-m2-cA 86 70 0.3375 0.3140 0.3857 3.79e-07 6nek-a1-m1-cA_6nek-a1-m2-cA
6 6nek-a1-m1-cA 86 70 0.3375 0.3140 0.3857 3.79e-07 6nek-a1-m1-cA_6nek-a1-m2-cA
7 2fne-a4-m1-cB 100 65 0.2750 0.2200 0.3385 6.92e-06 2fne-a4-m1-cB_2fne-a4-m2-cC
8 2fne-a4-m2-cC 104 65 0.2750 0.2115 0.3385 8.44e-06 2fne-a4-m1-cB_2fne-a4-m2-cC
9 2iwp-a1-m1-cA 92 57 0.2625 0.2283 0.3684 1.43e-05 2iwp-a1-m1-cA_2iwp-a1-m1-cB
10 2iwp-a1-m1-cB 106 57 0.2625 0.1981 0.3684 1.71e-05 2iwp-a1-m1-cA_2iwp-a1-m1-cB
11 7m4r-a1-m1-cA 360 56 0.2125 0.0472 0.3036 0.002 7m4r-a1-m1-cB_7m4r-a1-m1-cA
12 3lny-a1-m6-cA 94 56 0.2375 0.2021 0.3393 0.002 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
13 3lny-a1-m5-cA 94 56 0.2375 0.2021 0.3393 0.002 3lny-a1-m5-cA_3lny-a1-m6-cA
14 3lny-a1-m3-cA 94 56 0.2375 0.2021 0.3393 0.002 3lny-a1-m3-cA_3lny-a1-m6-cA
15 3cbx-a1-m1-cB 99 56 0.2125 0.1717 0.3036 0.003 3cbx-a1-m1-cB_3cbx-a1-m1-cA
16 1n7f-a1-m1-cB 86 46 0.2000 0.1860 0.3478 0.003 1n7f-a1-m1-cA_1n7f-a1-m1-cB
17 1n7f-a1-m1-cA 86 46 0.2000 0.1860 0.3478 0.003 1n7f-a1-m1-cA_1n7f-a1-m1-cB
18 7qcs-a1-m1-cA 97 57 0.2125 0.1753 0.2982 0.003 7qcs-a1-m1-cA_7qcs-a1-m1-cB
19 3cby-a1-m1-cB 98 56 0.2125 0.1735 0.3036 0.003 3cby-a1-m1-cB_3cby-a1-m1-cA
20 7qcs-a1-m1-cB 98 57 0.2125 0.1735 0.2982 0.003 7qcs-a1-m1-cA_7qcs-a1-m1-cB
21 3cbx-a1-m1-cA 105 56 0.2125 0.1619 0.3036 0.004 3cbx-a1-m1-cB_3cbx-a1-m1-cA
22 2rey-a1-m2-cA 91 56 0.2125 0.1868 0.3036 0.004 2rey-a1-m1-cA_2rey-a1-m2-cA
23 2rey-a1-m1-cA 91 56 0.2125 0.1868 0.3036 0.004 2rey-a1-m1-cA_2rey-a1-m2-cA
24 3cc0-a1-m1-cA 106 56 0.2125 0.1604 0.3036 0.004 3cc0-a1-m1-cC_3cc0-a1-m1-cA
25 3cby-a1-m1-cA 101 56 0.2125 0.1683 0.3036 0.004 3cby-a1-m1-cB_3cby-a1-m1-cA
26 2qkt-a1-m4-cB 85 79 0.3000 0.2824 0.3038 0.005 2qkt-a1-m1-cA_2qkt-a1-m4-cB, 2qkt-a1-m2-cA_2qkt-a1-m4-cB, 2qkt-a1-m3-cB_2qkt-a1-m4-cB
27 2qkt-a1-m3-cB 85 79 0.3000 0.2824 0.3038 0.005 2qkt-a1-m3-cB_2qkt-a1-m4-cB
28 2qkt-a1-m2-cA 85 79 0.3000 0.2824 0.3038 0.005 2qkt-a1-m1-cA_2qkt-a1-m2-cA, 2qkt-a1-m2-cA_2qkt-a1-m4-cB
29 2qkt-a1-m1-cA 85 79 0.3000 0.2824 0.3038 0.005 2qkt-a1-m1-cA_2qkt-a1-m2-cA, 2qkt-a1-m1-cA_2qkt-a1-m4-cB
30 2qkv-a1-m6-cB 92 79 0.3000 0.2609 0.3038 0.005 2qkv-a1-m2-cA_2qkv-a1-m6-cB, 2qkv-a1-m3-cA_2qkv-a1-m6-cB, 2qkv-a1-m5-cB_2qkv-a1-m6-cB
31 2qkv-a1-m5-cB 92 79 0.3000 0.2609 0.3038 0.005 2qkv-a1-m5-cB_2qkv-a1-m6-cB
32 2qkv-a1-m3-cA 92 79 0.3000 0.2609 0.3038 0.005 2qkv-a1-m3-cA_2qkv-a1-m6-cB
33 2qkv-a1-m2-cA 92 79 0.3000 0.2609 0.3038 0.005 2qkv-a1-m2-cA_2qkv-a1-m6-cB
34 1kwa-a5-m2-cB 86 62 0.2000 0.1860 0.2581 0.005 1kwa-a5-m2-cB_1kwa-a5-m1-cA
35 1kwa-a4-m1-cB 86 62 0.2000 0.1860 0.2581 0.005 1kwa-a4-m1-cB_1kwa-a4-m1-cA
36 5tyt-a2-m1-cC 87 48 0.2250 0.2069 0.3750 0.006 5tyt-a2-m1-cC_5tyt-a2-m2-cD
37 5tyt-a2-m2-cD 89 48 0.2250 0.2022 0.3750 0.006 5tyt-a2-m1-cC_5tyt-a2-m2-cD
38 3cc0-a1-m1-cC 98 44 0.1750 0.1429 0.3182 0.007 3cc0-a1-m1-cC_3cc0-a1-m1-cA, 3cc0-a1-m1-cC_3cc0-a1-m1-cB
39 1kwa-a5-m1-cA 88 58 0.1875 0.1705 0.2586 0.014 1kwa-a5-m2-cB_1kwa-a5-m1-cA
40 1kwa-a4-m1-cA 88 58 0.1875 0.1705 0.2586 0.014 1kwa-a4-m1-cB_1kwa-a4-m1-cA
41 6xs4-a1-m1-cB 810 66 0.2375 0.0235 0.2879 0.025 6xs4-a1-m1-cA_6xs4-a1-m1-cB
42 6xs4-a1-m1-cA 810 66 0.2375 0.0235 0.2879 0.025 6xs4-a1-m1-cA_6xs4-a1-m1-cB
43 5glj-a1-m1-cB 93 85 0.2625 0.2258 0.2471 0.049 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
44 5glj-a1-m1-cD 96 60 0.2125 0.1771 0.2833 0.050 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
45 5glj-a1-m1-cA 96 60 0.2125 0.1771 0.2833 0.050 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
46 3cc0-a1-m1-cB 103 56 0.2125 0.1650 0.3036 0.058 3cc0-a1-m1-cC_3cc0-a1-m1-cB
47 3b76-a1-m1-cA 101 57 0.1875 0.1485 0.2632 0.060 3b76-a1-m1-cA_3b76-a1-m1-cB
48 3b76-a1-m1-cB 102 57 0.1875 0.1471 0.2632 0.064 3b76-a1-m1-cA_3b76-a1-m1-cB
49 2xkx-a1-m1-cA 721 42 0.2000 0.0222 0.3810 0.065 2xkx-a1-m1-cB_2xkx-a1-m1-cA
50 2xkx-a1-m1-cA 721 39 0.1875 0.0208 0.3846 0.75 2xkx-a1-m1-cB_2xkx-a1-m1-cA
51 2xkx-a1-m1-cA 721 57 0.1875 0.0208 0.2632 1.1 2xkx-a1-m1-cB_2xkx-a1-m1-cA
52 2xkx-a1-m1-cB 718 42 0.2000 0.0223 0.3810 0.066 2xkx-a1-m1-cB_2xkx-a1-m1-cA
53 2xkx-a1-m1-cB 718 39 0.1875 0.0209 0.3846 0.76 2xkx-a1-m1-cB_2xkx-a1-m1-cA
54 2xkx-a1-m1-cB 718 57 0.1875 0.0209 0.2632 1.1 2xkx-a1-m1-cB_2xkx-a1-m1-cA
55 2p3w-a2-m3-cB 104 59 0.2375 0.1827 0.3220 0.090 2p3w-a2-m1-cB_2p3w-a2-m3-cB
56 2p3w-a2-m1-cB 104 59 0.2375 0.1827 0.3220 0.090 2p3w-a2-m1-cB_2p3w-a2-m3-cB
57 2qku-a2-m2-cB 82 70 0.2375 0.2317 0.2714 0.093 2qku-a2-m2-cB_2qku-a2-m2-cC
58 2qku-a2-m1-cB 82 70 0.2375 0.2317 0.2714 0.093 2qku-a2-m1-cB_2qku-a2-m2-cC
59 2qku-a2-m2-cC 88 70 0.2375 0.2159 0.2714 0.11 2qku-a2-m1-cB_2qku-a2-m2-cC, 2qku-a2-m2-cB_2qku-a2-m2-cC
60 7qrt-a1-m1-cB 91 34 0.2000 0.1758 0.4706 0.16 7qrt-a1-m1-cB_7qrt-a1-m1-cA
61 7qrt-a1-m1-cA 92 34 0.2000 0.1739 0.4706 0.16 7qrt-a1-m1-cB_7qrt-a1-m1-cA
62 3axa-a2-m3-cB 97 57 0.2125 0.1753 0.2982 0.16 3axa-a2-m1-cB_3axa-a2-m3-cB
63 3axa-a2-m1-cB 97 57 0.2125 0.1753 0.2982 0.16 3axa-a2-m1-cB_3axa-a2-m3-cB
64 7qcr-a1-m1-cA 87 57 0.2125 0.1954 0.2982 0.17 7qcr-a1-m1-cB_7qcr-a1-m1-cA
65 3zrt-a1-m1-cC 188 42 0.2000 0.0851 0.3810 0.18 3zrt-a1-m1-cC_3zrt-a1-m1-cA
66 3zrt-a1-m1-cC 188 59 0.1875 0.0798 0.2542 2.5 3zrt-a1-m1-cC_3zrt-a1-m1-cA
67 4m28-a2-m2-cA 483 36 0.1625 0.0269 0.3611 0.18 4m28-a2-m1-cA_4m28-a2-m2-cA
68 4m28-a2-m1-cA 483 36 0.1625 0.0269 0.3611 0.18 4m28-a2-m1-cA_4m28-a2-m2-cA
69 3zrt-a1-m1-cA 197 42 0.2000 0.0812 0.3810 0.18 3zrt-a1-m1-cC_3zrt-a1-m1-cA
70 3zrt-a1-m1-cA 197 59 0.1875 0.0761 0.2542 2.8 3zrt-a1-m1-cC_3zrt-a1-m1-cA
71 7qcr-a1-m1-cB 86 57 0.2125 0.1977 0.2982 0.20 7qcr-a1-m1-cB_7qcr-a1-m1-cA
72 7mfw-a2-m2-cB 98 29 0.1375 0.1122 0.3793 0.21 7mfw-a2-m1-cA_7mfw-a2-m2-cB
73 7mfw-a1-m1-cB 98 29 0.1375 0.1122 0.3793 0.21 7mfw-a1-m1-cA_7mfw-a1-m1-cB
74 7mfw-a2-m1-cA 93 29 0.1375 0.1183 0.3793 0.21 7mfw-a2-m1-cA_7mfw-a2-m2-cB
75 7mfw-a1-m1-cA 93 29 0.1375 0.1183 0.3793 0.21 7mfw-a1-m1-cA_7mfw-a1-m1-cB
76 2wl7-a1-m3-cA 96 57 0.2000 0.1667 0.2807 0.22 2wl7-a1-m2-cA_2wl7-a1-m3-cA
77 2wl7-a1-m2-cA 96 57 0.2000 0.1667 0.2807 0.22 2wl7-a1-m2-cA_2wl7-a1-m3-cA
78 3rl8-a1-m1-cE 90 42 0.1750 0.1556 0.3333 0.25 3rl8-a1-m1-cE_3rl8-a1-m1-cD
79 3rl8-a1-m1-cB 90 42 0.1750 0.1556 0.3333 0.25 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
80 4h11-a3-m2-cA 102 57 0.2000 0.1569 0.2807 0.26 4h11-a3-m1-cB_4h11-a3-m2-cA
81 4h11-a3-m1-cB 102 57 0.2000 0.1569 0.2807 0.26 4h11-a3-m1-cB_4h11-a3-m2-cA
82 3rl8-a1-m1-cD 94 42 0.1750 0.1489 0.3333 0.28 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
83 3rl8-a1-m1-cA 94 42 0.1750 0.1489 0.3333 0.28 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
84 3rl8-a1-m1-cC 95 42 0.1750 0.1474 0.3333 0.30 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
85 4amh-a1-m1-cB 92 42 0.1750 0.1522 0.3333 0.33 4amh-a1-m1-cB_4amh-a1-m1-cA
86 2iwq-a1-m2-cA 92 47 0.1875 0.1630 0.3191 0.36 2iwq-a1-m1-cA_2iwq-a1-m2-cA
87 2iwq-a1-m1-cA 92 47 0.1875 0.1630 0.3191 0.36 2iwq-a1-m1-cA_2iwq-a1-m2-cA
88 4amh-a1-m1-cA 94 42 0.1750 0.1489 0.3333 0.37 4amh-a1-m1-cB_4amh-a1-m1-cA
89 2x7z-a1-m2-cA 99 42 0.1750 0.1414 0.3333 0.38 2x7z-a1-m1-cA_2x7z-a1-m2-cA
90 2x7z-a1-m1-cA 99 42 0.1750 0.1414 0.3333 0.38 2x7z-a1-m1-cA_2x7z-a1-m2-cA
91 4cmz-a2-m2-cC 86 45 0.1875 0.1744 0.3333 0.64 4cmz-a2-m1-cC_4cmz-a2-m2-cC
92 4cmz-a2-m1-cC 86 45 0.1875 0.1744 0.3333 0.64 4cmz-a2-m1-cC_4cmz-a2-m2-cC
93 5jxb-a1-m1-cA 117 43 0.2000 0.1368 0.3721 0.79 5jxb-a1-m1-cA_5jxb-a1-m1-cC
94 5jxb-a1-m1-cC 119 43 0.2000 0.1345 0.3721 0.82 5jxb-a1-m1-cA_5jxb-a1-m1-cC
95 8ah6-a1-m1-cB 102 43 0.2000 0.1569 0.3721 0.83 8ah6-a1-m1-cA_8ah6-a1-m1-cB
96 4dd5-a1-m4-cA 387 29 0.1500 0.0310 0.4138 0.85 4dd5-a1-m1-cA_4dd5-a1-m4-cA, 4dd5-a1-m2-cA_4dd5-a1-m4-cA, 4dd5-a1-m3-cA_4dd5-a1-m4-cA
97 4dd5-a1-m3-cA 387 29 0.1500 0.0310 0.4138 0.85 4dd5-a1-m3-cA_4dd5-a1-m4-cA
98 4dd5-a1-m2-cA 387 29 0.1500 0.0310 0.4138 0.85 4dd5-a1-m2-cA_4dd5-a1-m4-cA
99 4dd5-a1-m1-cA 387 29 0.1500 0.0310 0.4138 0.85 4dd5-a1-m1-cA_4dd5-a1-m4-cA
100 8ah6-a1-m1-cA 101 43 0.2000 0.1584 0.3721 0.89 8ah6-a1-m1-cA_8ah6-a1-m1-cB
101 1tp5-a2-m2-cA 115 43 0.2000 0.1391 0.3721 1.1 1tp5-a2-m1-cA_1tp5-a2-m2-cA
102 1tp5-a2-m1-cA 115 43 0.2000 0.1391 0.3721 1.1 1tp5-a2-m1-cA_1tp5-a2-m2-cA
103 3o46-a1-m3-cA 83 49 0.1500 0.1446 0.2449 1.4 3o46-a1-m2-cA_3o46-a1-m3-cA
104 3o46-a1-m2-cA 83 49 0.1500 0.1446 0.2449 1.4 3o46-a1-m2-cA_3o46-a1-m3-cA
105 5jd8-a1-m3-cA 272 31 0.1750 0.0515 0.4516 2.4 5jd8-a1-m2-cA_5jd8-a1-m3-cA
106 5jd8-a1-m2-cA 272 31 0.1750 0.0515 0.4516 2.4 5jd8-a1-m2-cA_5jd8-a1-m3-cA
107 2i04-a1-m1-cB 85 29 0.1250 0.1176 0.3448 3.2 2i04-a1-m1-cA_2i04-a1-m1-cB
108 2i04-a1-m1-cA 85 29 0.1250 0.1176 0.3448 3.2 2i04-a1-m1-cA_2i04-a1-m1-cB
109 1sru-a1-m1-cC 96 39 0.1500 0.1250 0.3077 3.3 1sru-a1-m1-cC_1sru-a1-m1-cA
110 1sru-a1-m1-cD 101 39 0.1500 0.1188 0.3077 4.2 1sru-a1-m1-cA_1sru-a1-m1-cD
111 1fcf-a2-m3-cA 387 48 0.1875 0.0388 0.3125 5.4 1fcf-a2-m2-cA_1fcf-a2-m3-cA
112 1fcf-a2-m2-cA 387 48 0.1875 0.0388 0.3125 5.4 1fcf-a2-m2-cA_1fcf-a2-m3-cA
113 4iw9-a1-m1-cA 210 59 0.2000 0.0762 0.2712 5.9 4iw9-a1-m1-cA_4iw9-a1-m1-cB
114 4iw9-a1-m1-cB 215 59 0.2000 0.0744 0.2712 6.1 4iw9-a1-m1-cA_4iw9-a1-m1-cB
115 6bjo-a1-m1-cA 86 60 0.1500 0.1395 0.2000 7.9 6bjo-a1-m1-cB_6bjo-a1-m1-cA
116 4bjz-a1-m2-cA 395 27 0.1250 0.0253 0.3704 9.8 4bjz-a1-m1-cA_4bjz-a1-m2-cA
117 4bjz-a1-m1-cA 395 27 0.1250 0.0253 0.3704 9.8 4bjz-a1-m1-cA_4bjz-a1-m2-cA
118 3hpk-a3-m1-cB 107 60 0.1500 0.1121 0.2000 9.9 3hpk-a3-m1-cB_3hpk-a3-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600