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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
MIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2puy-a1-m1-cA 59 59 1.0000 1.0000 1.0000 2.02e-39 2puy-a1-m1-cA_2puy-a1-m1-cB
2 2puy-a1-m1-cB 60 59 1.0000 0.9833 1.0000 2.36e-39 2puy-a1-m1-cA_2puy-a1-m1-cB
3 5szb-a2-m2-cA 115 45 0.3220 0.1652 0.4222 7.98e-08 5szb-a2-m1-cA_5szb-a2-m2-cA
4 5szb-a2-m1-cA 115 45 0.3220 0.1652 0.4222 7.98e-08 5szb-a2-m1-cA_5szb-a2-m2-cA
5 4qf3-a3-m1-cB 57 50 0.3559 0.3684 0.4200 2.27e-07 4qf3-a3-m1-cA_4qf3-a3-m1-cB
6 4qf3-a3-m1-cA 57 50 0.3559 0.3684 0.4200 2.27e-07 4qf3-a3-m1-cA_4qf3-a3-m1-cB
7 4qf2-a2-m1-cD 53 50 0.3390 0.3774 0.4000 2.45e-06 4qf2-a2-m1-cB_4qf2-a2-m1-cD
8 4qf2-a2-m1-cB 51 48 0.3390 0.3922 0.4167 3.60e-06 4qf2-a2-m1-cB_4qf2-a2-m1-cD
9 3sox-a4-m3-cB 65 33 0.2881 0.2615 0.5152 3.64e-06 3sox-a4-m1-cB_3sox-a4-m3-cB
10 3sox-a4-m1-cB 65 33 0.2881 0.2615 0.5152 3.64e-06 3sox-a4-m1-cB_3sox-a4-m3-cB
11 7duf-a1-m1-cA 62 36 0.2373 0.2258 0.3889 0.059 7duf-a1-m1-cB_7duf-a1-m1-cA
12 7duf-a1-m1-cB 57 35 0.2373 0.2456 0.4000 0.073 7duf-a1-m1-cB_7duf-a1-m1-cA
13 6a97-a1-m1-cC 225 24 0.1864 0.0489 0.4583 0.97 6a97-a1-m1-cC_6a97-a1-m1-cA
14 5c13-a2-m1-cG 59 46 0.2203 0.2203 0.2826 2.1 5c13-a2-m1-cC_5c13-a2-m1-cG
15 5c13-a2-m1-cC 59 46 0.2203 0.2203 0.2826 2.1 5c13-a2-m1-cC_5c13-a2-m1-cG
16 2y6e-a1-m1-cD 327 27 0.1695 0.0306 0.3704 3.6 2y6e-a1-m1-cE_2y6e-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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