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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNN
AEHLAQSIADLERGKTITKDIDV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6l8e-a1-m1-cA 83 83 1.0000 1.0000 1.0000 4.56e-56 6l8e-a1-m1-cB_6l8e-a1-m1-cA
2 6l8e-a2-m1-cJ 59 59 0.7108 1.0000 1.0000 4.91e-37 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
3 6l8e-a2-m1-cL 57 57 0.6867 1.0000 1.0000 5.78e-35 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
4 6l8e-a1-m1-cB 54 54 0.6506 1.0000 1.0000 1.95e-32 6l8e-a1-m1-cB_6l8e-a1-m1-cA
5 2a6q-a3-m1-cC 86 77 0.4096 0.3953 0.4416 6.74e-15 2a6q-a3-m1-cD_2a6q-a3-m1-cC
6 2a6q-a3-m1-cA 86 77 0.4096 0.3953 0.4416 6.74e-15 2a6q-a3-m1-cD_2a6q-a3-m1-cA
7 3oei-a3-m1-cI 83 76 0.3735 0.3735 0.4079 2.22e-11 3oei-a3-m1-cI_3oei-a3-m1-cJ
8 3cto-a7-m1-cB 83 77 0.3614 0.3614 0.3896 2.76e-10 3cto-a7-m1-cA_3cto-a7-m1-cB
9 3cto-a6-m1-cB 83 77 0.3614 0.3614 0.3896 2.76e-10 3cto-a6-m5-cA_3cto-a6-m1-cB
10 3d55-a4-m2-cB 84 77 0.3614 0.3571 0.3896 3.12e-10 3d55-a4-m2-cB_3d55-a4-m1-cC
11 3oei-a3-m1-cJ 86 77 0.3614 0.3488 0.3896 3.12e-10 3oei-a3-m1-cI_3oei-a3-m1-cJ
12 3d55-a4-m1-cC 86 77 0.3614 0.3488 0.3896 3.16e-10 3d55-a4-m1-cA_3d55-a4-m1-cC, 3d55-a4-m2-cB_3d55-a4-m1-cC
13 3cto-a5-m5-cC 86 77 0.3614 0.3488 0.3896 3.16e-10 3cto-a5-m1-cD_3cto-a5-m5-cC
14 3d55-a4-m1-cA 68 63 0.3133 0.3824 0.4127 2.14e-09 3d55-a4-m1-cA_3d55-a4-m1-cC
15 3cto-a7-m1-cA 68 63 0.3133 0.3824 0.4127 2.14e-09 3cto-a7-m1-cA_3cto-a7-m1-cB, 3cto-a7-m1-cD_3cto-a7-m1-cA
16 3cto-a6-m5-cA 68 63 0.3133 0.3824 0.4127 2.14e-09 3cto-a6-m5-cA_3cto-a6-m1-cB
17 3cto-a7-m1-cD 65 62 0.3012 0.3846 0.4032 9.17e-09 3cto-a7-m1-cD_3cto-a7-m1-cA
18 3cto-a5-m1-cD 65 62 0.3012 0.3846 0.4032 9.17e-09 3cto-a5-m1-cD_3cto-a5-m5-cC
19 2a6q-a3-m1-cD 58 50 0.2651 0.3793 0.4400 9.08e-08 2a6q-a3-m1-cB_2a6q-a3-m1-cD, 2a6q-a3-m1-cD_2a6q-a3-m1-cA, 2a6q-a3-m1-cD_2a6q-a3-m1-cC
20 2a6q-a3-m1-cB 58 50 0.2651 0.3793 0.4400 9.08e-08 2a6q-a3-m1-cB_2a6q-a3-m1-cD
21 3g5o-a1-m1-cD 92 80 0.2651 0.2391 0.2750 3.81e-06 3g5o-a1-m1-cA_3g5o-a1-m1-cD
22 3g5o-a1-m1-cA 92 80 0.2651 0.2391 0.2750 3.81e-06 3g5o-a1-m1-cA_3g5o-a1-m1-cD
23 7v6w-a2-m1-cI 56 56 0.2048 0.3036 0.3036 4.47e-04 7v6w-a2-m1-cI_7v6w-a2-m1-cJ, 7v6w-a2-m1-cI_7v6w-a2-m1-cK
24 7v6w-a2-m1-cK 58 56 0.2048 0.2931 0.3036 5.30e-04 7v6w-a2-m1-cI_7v6w-a2-m1-cK
25 7v6w-a2-m1-cJ 85 56 0.2048 0.2000 0.3036 0.001 7v6w-a2-m1-cI_7v6w-a2-m1-cJ
26 3mpv-a2-m3-cB 200 61 0.2410 0.1000 0.3279 0.34 3mpv-a2-m2-cB_3mpv-a2-m3-cB
27 3mpv-a2-m2-cB 200 61 0.2410 0.1000 0.3279 0.34 3mpv-a2-m2-cB_3mpv-a2-m3-cB
28 1ji4-a1-m1-cK 144 34 0.1446 0.0833 0.3529 1.4 1ji4-a1-m1-cJ_1ji4-a1-m1-cK
29 1ji4-a1-m1-cJ 144 34 0.1446 0.0833 0.3529 1.4 1ji4-a1-m1-cJ_1ji4-a1-m1-cK
30 7u6l-a2-m1-cB 435 21 0.1446 0.0276 0.5714 3.8 7u6l-a2-m1-cB_7u6l-a2-m1-cC
31 7u6l-a2-m1-cC 435 21 0.1446 0.0276 0.5714 4.0 7u6l-a2-m1-cB_7u6l-a2-m1-cC
32 4evb-a1-m9-cA 143 34 0.1325 0.0769 0.3235 6.9 4evb-a1-m4-cA_4evb-a1-m9-cA
33 4evb-a1-m4-cA 143 34 0.1325 0.0769 0.3235 6.9 4evb-a1-m4-cA_4evb-a1-m9-cA
34 3ta8-a1-m9-cA 144 34 0.1325 0.0764 0.3235 7.3 3ta8-a1-m8-cA_3ta8-a1-m9-cA
35 3ta8-a1-m8-cA 144 34 0.1325 0.0764 0.3235 7.3 3ta8-a1-m8-cA_3ta8-a1-m9-cA

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Reference:
Jacob Schwartz et al.

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