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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MIKENVYFDGNVKSLGFSQQDGESTVGVMAPGQYTFGTGAPERMTVVKGALTIKRVTDAD
WVTFTAGEAFEVAGNSSFDLQVEVATAYLCEFLP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eym-a1-m1-cA 96 94 1.0000 0.9792 1.0000 3.04e-66 7eym-a1-m1-cB_7eym-a1-m1-cA
2 7eym-a1-m1-cB 94 94 1.0000 1.0000 1.0000 3.97e-66 7eym-a1-m1-cB_7eym-a1-m1-cA
3 2oyz-a1-m2-cA 92 92 0.6596 0.6739 0.6739 5.69e-39 2oyz-a1-m1-cA_2oyz-a1-m2-cA
4 2oyz-a1-m1-cA 92 92 0.6596 0.6739 0.6739 5.69e-39 2oyz-a1-m1-cA_2oyz-a1-m2-cA
5 7eyl-a1-m1-cB 95 94 0.5213 0.5158 0.5213 3.54e-29 7eyl-a1-m1-cA_7eyl-a1-m1-cB
6 7eyl-a1-m1-cA 95 94 0.5213 0.5158 0.5213 3.54e-29 7eyl-a1-m1-cA_7eyl-a1-m1-cB
7 7eyp-a1-m1-cB 94 92 0.4894 0.4894 0.5000 1.64e-25 7eyp-a1-m1-cA_7eyp-a1-m1-cB
8 7eyp-a1-m1-cA 94 92 0.4894 0.4894 0.5000 1.64e-25 7eyp-a1-m1-cA_7eyp-a1-m1-cB
9 7eyk-a1-m2-cA 92 93 0.4574 0.4674 0.4624 3.08e-21 7eyk-a1-m1-cA_7eyk-a1-m2-cA
10 7eyk-a1-m1-cA 92 93 0.4574 0.4674 0.4624 3.08e-21 7eyk-a1-m1-cA_7eyk-a1-m2-cA
11 3hqx-a1-m2-cA 104 93 0.3404 0.3077 0.3441 1.04e-09 3hqx-a1-m1-cA_3hqx-a1-m2-cA
12 3hqx-a1-m1-cA 104 93 0.3404 0.3077 0.3441 1.04e-09 3hqx-a1-m1-cA_3hqx-a1-m2-cA
13 3eo6-a1-m1-cB 101 79 0.2128 0.1980 0.2532 0.13 3eo6-a1-m1-cA_3eo6-a1-m1-cB
14 3eo6-a1-m1-cA 101 79 0.2128 0.1980 0.2532 0.13 3eo6-a1-m1-cA_3eo6-a1-m1-cB
15 3ks7-a2-m1-cD 386 24 0.1064 0.0259 0.4167 0.74 3ks7-a2-m1-cC_3ks7-a2-m1-cD
16 3ks7-a2-m1-cC 384 24 0.1064 0.0260 0.4167 0.75 3ks7-a2-m1-cC_3ks7-a2-m1-cD
17 3waa-a1-m1-cG 104 31 0.1277 0.1154 0.3871 3.5 3waa-a1-m1-cG_3waa-a1-m1-cC
18 3waa-a1-m1-cC 107 31 0.1277 0.1121 0.3871 3.7 3waa-a1-m1-cG_3waa-a1-m1-cC
19 3quj-a1-m1-cB 298 25 0.1170 0.0369 0.4400 7.5 3quj-a1-m1-cA_3quj-a1-m1-cB
20 3quj-a1-m1-cA 295 25 0.1170 0.0373 0.4400 7.6 3quj-a1-m1-cA_3quj-a1-m1-cB
21 2pa4-a3-m1-cD 295 45 0.1702 0.0542 0.3556 8.4 2pa4-a3-m1-cA_2pa4-a3-m1-cD
22 2pa4-a1-m1-cD 295 45 0.1702 0.0542 0.3556 8.4 2pa4-a1-m1-cD_2pa4-a1-m1-cC
23 2pa4-a1-m1-cC 299 45 0.1702 0.0535 0.3556 8.7 2pa4-a1-m1-cD_2pa4-a1-m1-cC
24 2pa4-a3-m1-cA 294 45 0.1702 0.0544 0.3556 9.0 2pa4-a3-m1-cA_2pa4-a3-m1-cD

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Reference:
Jacob Schwartz et al.

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