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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
MIKPLGDRVVVKRIPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGE
EYVILSERDLLAVLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wnr-a1-m1-cE 75 75 1.0000 1.0000 1.0000 4.01e-47 1wnr-a1-m1-cD_1wnr-a1-m1-cE
2 1wnr-a1-m1-cD 75 75 1.0000 1.0000 1.0000 4.01e-47 1wnr-a1-m1-cD_1wnr-a1-m1-cC, 1wnr-a1-m1-cD_1wnr-a1-m1-cE
3 1wnr-a1-m1-cC 84 84 1.0000 0.8929 0.8929 4.00e-44 1wnr-a1-m1-cD_1wnr-a1-m1-cC
4 1lep-a1-m1-cG 81 76 0.5867 0.5432 0.5789 4.26e-24 1lep-a1-m1-cF_1lep-a1-m1-cG
5 1lep-a1-m1-cF 81 76 0.5867 0.5432 0.5789 4.26e-24 1lep-a1-m1-cF_1lep-a1-m1-cG
6 1hx5-a1-m1-cC 82 82 0.5867 0.5366 0.5366 4.99e-23 1hx5-a1-m1-cB_1hx5-a1-m1-cC
7 1hx5-a1-m1-cB 82 82 0.5867 0.5366 0.5366 4.99e-23 1hx5-a1-m1-cB_1hx5-a1-m1-cC
8 1p3h-a3-m1-cM 99 94 0.6000 0.4545 0.4787 6.60e-22 1p3h-a3-m1-cD_1p3h-a3-m1-cM
9 1p3h-a3-m1-cH 99 94 0.6000 0.4545 0.4787 6.60e-22 1p3h-a3-m1-cC_1p3h-a3-m1-cH
10 1p3h-a3-m1-cD 99 94 0.6000 0.4545 0.4787 6.60e-22 1p3h-a3-m1-cD_1p3h-a3-m1-cM
11 1p3h-a3-m1-cK 98 94 0.6000 0.4592 0.4787 7.09e-22 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
12 1p3h-a3-m1-cJ 98 94 0.6000 0.4592 0.4787 7.09e-22 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
13 1p3h-a3-m1-cC 98 94 0.6000 0.4592 0.4787 7.09e-22 1p3h-a3-m1-cC_1p3h-a3-m1-cH
14 1pf9-a1-m1-cR 97 94 0.5467 0.4227 0.4362 1.01e-16 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
15 1pf9-a1-m1-cQ 97 94 0.5467 0.4227 0.4362 1.01e-16 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
16 7ekq-a1-m1-cS 194 94 0.4400 0.1701 0.3511 5.81e-09 7ekq-a1-m1-cR_7ekq-a1-m1-cS
17 7ekq-a1-m1-cS 194 93 0.4000 0.1546 0.3226 3.56e-08 7ekq-a1-m1-cR_7ekq-a1-m1-cS
18 7ekq-a1-m1-cR 194 94 0.4400 0.1701 0.3511 5.81e-09 7ekq-a1-m1-cR_7ekq-a1-m1-cS
19 7ekq-a1-m1-cR 194 93 0.4000 0.1546 0.3226 3.56e-08 7ekq-a1-m1-cR_7ekq-a1-m1-cS
20 7bzy-a1-m1-c13 584 35 0.2000 0.0257 0.4286 0.72 7bzy-a1-m1-c11_7bzy-a1-m1-c13
21 7bzy-a1-m1-c11 584 35 0.2000 0.0257 0.4286 0.72 7bzy-a1-m1-c11_7bzy-a1-m1-c13
22 3tmr-a1-m1-cB 220 25 0.1733 0.0591 0.5200 1.5 3tmr-a1-m1-cB_3tmr-a1-m1-cA
23 2vvh-a1-m1-cD 220 25 0.1733 0.0591 0.5200 1.5 2vvh-a1-m1-cD_2vvh-a1-m1-cC
24 2vvh-a1-m1-cC 222 25 0.1733 0.0586 0.5200 1.5 2vvh-a1-m1-cD_2vvh-a1-m1-cC
25 3tmr-a1-m1-cA 221 25 0.1733 0.0588 0.5200 1.5 3tmr-a1-m1-cB_3tmr-a1-m1-cA
26 2zc0-a3-m1-cB 405 41 0.2133 0.0395 0.3902 2.7 2zc0-a3-m1-cA_2zc0-a3-m1-cB
27 2zc0-a3-m1-cA 405 41 0.2133 0.0395 0.3902 2.7 2zc0-a3-m1-cA_2zc0-a3-m1-cB
28 2zc0-a1-m1-cD 405 41 0.2133 0.0395 0.3902 2.7 2zc0-a1-m1-cA_2zc0-a1-m1-cD, 2zc0-a1-m1-cB_2zc0-a1-m1-cD
29 2zc0-a1-m1-cB 405 41 0.2133 0.0395 0.3902 2.7 2zc0-a1-m1-cB_2zc0-a1-m1-cD
30 2zc0-a1-m1-cA 405 41 0.2133 0.0395 0.3902 2.7 2zc0-a1-m1-cA_2zc0-a1-m1-cD
31 1o0w-a1-m1-cA 238 32 0.1600 0.0504 0.3750 3.2 1o0w-a1-m1-cA_1o0w-a1-m1-cB
32 1o0w-a1-m1-cB 239 32 0.1600 0.0502 0.3750 3.3 1o0w-a1-m1-cA_1o0w-a1-m1-cB
33 6iym-a1-m1-cB 277 30 0.1333 0.0361 0.3333 8.5 6iym-a1-m1-cA_6iym-a1-m1-cB
34 6iym-a1-m1-cA 277 30 0.1333 0.0361 0.3333 8.5 6iym-a1-m1-cA_6iym-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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