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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
MIKPLGDRVVVKRIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYG
GTEIEIDGEEYVILSERDLLAVLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wnr-a1-m1-cC 84 84 1.0000 1.0000 1.0000 8.37e-54 1wnr-a1-m1-cD_1wnr-a1-m1-cC
2 1wnr-a1-m1-cE 75 84 0.8929 1.0000 0.8929 4.47e-44 1wnr-a1-m1-cD_1wnr-a1-m1-cE
3 1wnr-a1-m1-cD 75 84 0.8929 1.0000 0.8929 4.47e-44 1wnr-a1-m1-cD_1wnr-a1-m1-cC, 1wnr-a1-m1-cD_1wnr-a1-m1-cE
4 1p3h-a3-m1-cM 99 94 0.6190 0.5253 0.5532 1.92e-29 1p3h-a3-m1-cD_1p3h-a3-m1-cM
5 1p3h-a3-m1-cH 99 94 0.6190 0.5253 0.5532 1.92e-29 1p3h-a3-m1-cC_1p3h-a3-m1-cH
6 1p3h-a3-m1-cD 99 94 0.6190 0.5253 0.5532 1.92e-29 1p3h-a3-m1-cD_1p3h-a3-m1-cM
7 1p3h-a3-m1-cK 98 94 0.6190 0.5306 0.5532 2.57e-29 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
8 1p3h-a3-m1-cJ 98 94 0.6190 0.5306 0.5532 2.57e-29 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
9 1p3h-a3-m1-cC 98 94 0.6190 0.5306 0.5532 2.57e-29 1p3h-a3-m1-cC_1p3h-a3-m1-cH
10 1lep-a1-m1-cG 81 84 0.5476 0.5679 0.5476 1.60e-24 1lep-a1-m1-cF_1lep-a1-m1-cG
11 1lep-a1-m1-cF 81 84 0.5476 0.5679 0.5476 1.60e-24 1lep-a1-m1-cF_1lep-a1-m1-cG
12 1hx5-a1-m1-cC 82 88 0.5476 0.5610 0.5227 6.52e-23 1hx5-a1-m1-cB_1hx5-a1-m1-cC
13 1hx5-a1-m1-cB 82 88 0.5476 0.5610 0.5227 6.52e-23 1hx5-a1-m1-cB_1hx5-a1-m1-cC
14 1pf9-a1-m1-cR 97 94 0.5476 0.4742 0.4894 2.28e-21 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
15 1pf9-a1-m1-cQ 97 94 0.5476 0.4742 0.4894 2.28e-21 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
16 7ekq-a1-m1-cS 194 93 0.3929 0.1701 0.3548 3.26e-12 7ekq-a1-m1-cR_7ekq-a1-m1-cS
17 7ekq-a1-m1-cS 194 94 0.4286 0.1856 0.3830 3.90e-12 7ekq-a1-m1-cR_7ekq-a1-m1-cS
18 7ekq-a1-m1-cR 194 93 0.3929 0.1701 0.3548 3.26e-12 7ekq-a1-m1-cR_7ekq-a1-m1-cS
19 7ekq-a1-m1-cR 194 94 0.4286 0.1856 0.3830 3.90e-12 7ekq-a1-m1-cR_7ekq-a1-m1-cS
20 3tmr-a1-m1-cA 221 25 0.1548 0.0588 0.5200 2.4 3tmr-a1-m1-cB_3tmr-a1-m1-cA
21 2vvh-a1-m1-cC 222 25 0.1548 0.0586 0.5200 2.4 2vvh-a1-m1-cD_2vvh-a1-m1-cC
22 3tmr-a1-m1-cB 220 25 0.1548 0.0591 0.5200 2.5 3tmr-a1-m1-cB_3tmr-a1-m1-cA
23 2vvh-a1-m1-cD 220 25 0.1548 0.0591 0.5200 2.5 2vvh-a1-m1-cD_2vvh-a1-m1-cC
24 7bzy-a1-m1-c13 584 21 0.1310 0.0188 0.5238 2.9 7bzy-a1-m1-c11_7bzy-a1-m1-c13
25 7bzy-a1-m1-c11 584 21 0.1310 0.0188 0.5238 2.9 7bzy-a1-m1-c11_7bzy-a1-m1-c13

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Reference:
Jacob Schwartz et al.

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