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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
MIKVPEDLERIGRELRARGLDTKRLLEEGPKLYPELSIPDLMAIALYDHLNLDPEFLYRL
LQQSR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8d03-a1-m2-cA 65 65 1.0000 1.0000 1.0000 4.30e-41 8d03-a1-m1-cA_8d03-a1-m2-cA
2 8d03-a1-m1-cA 65 65 1.0000 1.0000 1.0000 4.30e-41 8d03-a1-m1-cA_8d03-a1-m2-cA
3 5cyx-a1-m3-cA 318 51 0.2154 0.0440 0.2745 0.74 5cyx-a1-m2-cA_5cyx-a1-m3-cA
4 5cyx-a1-m2-cA 318 51 0.2154 0.0440 0.2745 0.74 5cyx-a1-m2-cA_5cyx-a1-m3-cA
5 5fx8-a1-m1-cB 556 32 0.2000 0.0234 0.4062 2.1 5fx8-a1-m1-cB_5fx8-a1-m1-cA
6 5fx8-a1-m1-cA 563 32 0.2000 0.0231 0.4062 2.1 5fx8-a1-m1-cB_5fx8-a1-m1-cA
7 6lkh-a1-m1-cD 170 40 0.2154 0.0824 0.3500 2.1 6lkh-a1-m1-cC_6lkh-a1-m1-cD
8 6lkh-a1-m1-cC 170 40 0.2154 0.0824 0.3500 2.1 6lkh-a1-m1-cC_6lkh-a1-m1-cD
9 8aoz-a1-m2-cAAA 325 18 0.1692 0.0338 0.6111 6.3 8aoz-a1-m1-cAAA_8aoz-a1-m2-cAAA
10 8aoz-a1-m1-cAAA 325 18 0.1692 0.0338 0.6111 6.3 8aoz-a1-m1-cAAA_8aoz-a1-m2-cAAA
11 2nrk-a1-m2-cA 163 24 0.1692 0.0675 0.4583 6.6 2nrk-a1-m1-cA_2nrk-a1-m2-cA
12 2nrk-a1-m1-cA 163 24 0.1692 0.0675 0.4583 6.6 2nrk-a1-m1-cA_2nrk-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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