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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MIKVTVTNSFFEVTGHAPDKTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKFEELE
NCEVKVLAAMVRSLKELEQKFPSQIRVEVIDNGS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1s12-a2-m1-cB 94 94 1.0000 1.0000 1.0000 1.19e-64 1s12-a2-m1-cC_1s12-a2-m1-cB
2 1s12-a2-m1-cC 91 91 0.9681 1.0000 1.0000 4.99e-62 1s12-a2-m1-cC_1s12-a2-m1-cB
3 3hwp-a1-m1-cB 276 79 0.2447 0.0833 0.2911 0.054 3hwp-a1-m1-cA_3hwp-a1-m1-cB
4 3hwp-a1-m1-cA 276 79 0.2447 0.0833 0.2911 0.054 3hwp-a1-m1-cA_3hwp-a1-m1-cB
5 1n9l-a3-m3-cA 109 64 0.1809 0.1560 0.2656 2.6 1n9l-a3-m1-cA_1n9l-a3-m3-cA
6 1n9l-a3-m1-cA 109 64 0.1809 0.1560 0.2656 2.6 1n9l-a3-m1-cA_1n9l-a3-m3-cA
7 1n9l-a2-m2-cA 109 64 0.1809 0.1560 0.2656 2.6 1n9l-a2-m1-cA_1n9l-a2-m2-cA
8 1n9l-a2-m1-cA 109 64 0.1809 0.1560 0.2656 2.6 1n9l-a2-m1-cA_1n9l-a2-m2-cA
9 6ehf-a1-m3-cA 318 14 0.1170 0.0346 0.7857 2.8 6ehf-a1-m2-cA_6ehf-a1-m3-cA
10 6ehf-a1-m2-cA 318 14 0.1170 0.0346 0.7857 2.8 6ehf-a1-m2-cA_6ehf-a1-m3-cA
11 2z7e-a2-m2-cB 140 33 0.1277 0.0857 0.3636 5.0 2z7e-a2-m1-cA_2z7e-a2-m2-cB, 2z7e-a2-m2-cA_2z7e-a2-m2-cB, 2z7e-a2-m2-cC_2z7e-a2-m2-cB
12 2z7e-a2-m2-cC 137 33 0.1277 0.0876 0.3636 6.1 2z7e-a2-m1-cC_2z7e-a2-m2-cC, 2z7e-a2-m2-cC_2z7e-a2-m2-cA, 2z7e-a2-m2-cC_2z7e-a2-m2-cB
13 2z7e-a2-m1-cC 137 33 0.1277 0.0876 0.3636 6.1 2z7e-a2-m1-cC_2z7e-a2-m2-cC
14 2z7e-a2-m2-cA 139 33 0.1277 0.0863 0.3636 6.1 2z7e-a2-m1-cA_2z7e-a2-m2-cA, 2z7e-a2-m2-cA_2z7e-a2-m2-cB, 2z7e-a2-m2-cC_2z7e-a2-m2-cA
15 2z7e-a2-m1-cA 139 33 0.1277 0.0863 0.3636 6.1 2z7e-a2-m1-cA_2z7e-a2-m2-cA, 2z7e-a2-m1-cA_2z7e-a2-m2-cB
16 7p0x-a1-m1-cB 580 24 0.1064 0.0172 0.4167 6.8 7p0x-a1-m1-cA_7p0x-a1-m1-cB
17 7p0x-a1-m1-cA 575 24 0.1064 0.0174 0.4167 7.3 7p0x-a1-m1-cA_7p0x-a1-m1-cB
18 5ume-a2-m1-cB 262 50 0.1277 0.0458 0.2400 9.2 5ume-a2-m1-cB_5ume-a2-m1-cF

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Reference:
Jacob Schwartz et al.

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