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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAG
DNKYMHLKVFKSLPGQNEDLVLTGYQVDKNKDDELTGF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1n9j-a1-m1-cB 98 98 1.0000 1.0000 1.0000 3.15e-68 1n9j-a1-m1-cA_1n9j-a1-m1-cB
2 1n9j-a1-m1-cA 98 98 1.0000 1.0000 1.0000 3.15e-68 1n9j-a1-m1-cA_1n9j-a1-m1-cB
3 2oct-a1-m2-cA 97 97 0.5204 0.5258 0.5258 3.12e-33 2oct-a1-m2-cB_2oct-a1-m2-cA
4 2oct-a1-m1-cA 97 97 0.5204 0.5258 0.5258 3.12e-33 2oct-a1-m2-cB_2oct-a1-m1-cA
5 2oct-a1-m2-cB 95 95 0.5204 0.5368 0.5368 5.51e-33 2oct-a1-m1-cB_2oct-a1-m2-cB, 2oct-a1-m2-cB_2oct-a1-m1-cA, 2oct-a1-m2-cB_2oct-a1-m2-cA
6 2oct-a1-m1-cB 95 95 0.5204 0.5368 0.5368 5.51e-33 2oct-a1-m1-cB_2oct-a1-m2-cB
7 3vwn-a1-m2-cX 384 95 0.2857 0.0729 0.2947 0.055 3vwn-a1-m1-cX_3vwn-a1-m2-cX
8 3vwn-a1-m1-cX 384 95 0.2857 0.0729 0.2947 0.055 3vwn-a1-m1-cX_3vwn-a1-m2-cX
9 3qrd-a3-m4-cD 111 59 0.1633 0.1441 0.2712 0.25 3qrd-a3-m1-cA_3qrd-a3-m4-cD, 3qrd-a3-m4-cC_3qrd-a3-m4-cD
10 3qrd-a3-m2-cA 111 59 0.1633 0.1441 0.2712 0.25 3qrd-a3-m2-cB_3qrd-a3-m2-cA
11 3qrd-a3-m1-cA 111 59 0.1633 0.1441 0.2712 0.25 3qrd-a3-m1-cA_3qrd-a3-m4-cD
12 1tij-a1-m1-cB 112 59 0.1633 0.1429 0.2712 0.33 1tij-a1-m1-cB_1tij-a1-m1-cA
13 1r4c-a8-m5-cH 110 59 0.1633 0.1455 0.2712 0.34 1r4c-a8-m1-cC_1r4c-a8-m5-cH, 1r4c-a8-m1-cD_1r4c-a8-m5-cH
14 1r4c-a8-m5-cG 110 59 0.1633 0.1455 0.2712 0.34 1r4c-a8-m1-cD_1r4c-a8-m5-cG
15 1r4c-a8-m1-cD 110 59 0.1633 0.1455 0.2712 0.34 1r4c-a8-m1-cD_1r4c-a8-m5-cG, 1r4c-a8-m1-cD_1r4c-a8-m5-cH
16 1r4c-a8-m1-cC 110 59 0.1633 0.1455 0.2712 0.34 1r4c-a8-m1-cC_1r4c-a8-m5-cH
17 1tij-a1-m1-cA 114 59 0.1633 0.1404 0.2712 0.39 1tij-a1-m1-cB_1tij-a1-m1-cA
18 3qrd-a3-m4-cC 108 47 0.1327 0.1204 0.2766 0.55 3qrd-a3-m2-cB_3qrd-a3-m4-cC, 3qrd-a3-m4-cC_3qrd-a3-m4-cD
19 3qrd-a3-m2-cB 104 47 0.1327 0.1250 0.2766 0.58 3qrd-a3-m2-cB_3qrd-a3-m2-cA, 3qrd-a3-m2-cB_3qrd-a3-m4-cC
20 4zm8-a2-m1-cC 109 62 0.1939 0.1743 0.3065 0.62 4zm8-a2-m1-cC_4zm8-a2-m1-cD
21 3ww1-a1-m2-cB 242 28 0.1122 0.0455 0.3929 1.5 3ww1-a1-m1-cA_3ww1-a1-m2-cB
22 3ww1-a1-m1-cA 242 28 0.1122 0.0455 0.3929 1.5 3ww1-a1-m1-cA_3ww1-a1-m2-cB
23 3ww3-a1-m2-cB 242 28 0.1122 0.0455 0.3929 1.5 3ww3-a1-m2-cA_3ww3-a1-m2-cB
24 3ww3-a1-m2-cA 240 28 0.1122 0.0458 0.3929 1.5 3ww3-a1-m2-cA_3ww3-a1-m2-cB
25 4zm8-a2-m1-cD 109 24 0.1122 0.1009 0.4583 1.7 4zm8-a2-m1-cC_4zm8-a2-m1-cD
26 3gyq-a1-m1-cB 261 55 0.1531 0.0575 0.2727 3.4 3gyq-a1-m1-cA_3gyq-a1-m1-cB
27 3gyq-a1-m1-cA 261 55 0.1531 0.0575 0.2727 3.4 3gyq-a1-m1-cA_3gyq-a1-m1-cB
28 3sva-a2-m8-cA 111 59 0.1531 0.1351 0.2542 3.8 3sva-a2-m2-cA_3sva-a2-m8-cA, 3sva-a2-m3-cA_3sva-a2-m8-cA, 3sva-a2-m4-cA_3sva-a2-m8-cA, 3sva-a2-m7-cA_3sva-a2-m8-cA
29 3sva-a2-m7-cA 111 59 0.1531 0.1351 0.2542 3.8 3sva-a2-m7-cA_3sva-a2-m8-cA
30 3sva-a2-m4-cA 111 59 0.1531 0.1351 0.2542 3.8 3sva-a2-m4-cA_3sva-a2-m8-cA
31 3sva-a2-m3-cA 111 59 0.1531 0.1351 0.2542 3.8 3sva-a2-m3-cA_3sva-a2-m8-cA
32 3sva-a2-m2-cA 111 59 0.1531 0.1351 0.2542 3.8 3sva-a2-m2-cA_3sva-a2-m8-cA
33 4x5t-a1-m1-cD 308 35 0.1224 0.0390 0.3429 4.2 4x5t-a1-m1-cC_4x5t-a1-m1-cD
34 4x5t-a1-m1-cC 308 35 0.1224 0.0390 0.3429 4.2 4x5t-a1-m1-cC_4x5t-a1-m1-cD
35 8fuy-a1-m1-cB 486 24 0.1020 0.0206 0.4167 4.3 8fuy-a1-m1-cA_8fuy-a1-m1-cB
36 8fuy-a1-m1-cA 485 24 0.1020 0.0206 0.4167 4.3 8fuy-a1-m1-cA_8fuy-a1-m1-cB
37 6vlo-a2-m1-cD 307 46 0.1224 0.0391 0.2609 5.9 6vlo-a2-m1-cD_6vlo-a2-m1-cC
38 3nva-a1-m1-cB 533 34 0.1633 0.0300 0.4706 7.4 3nva-a1-m1-cA_3nva-a1-m1-cB
39 3nva-a1-m1-cA 533 34 0.1633 0.0300 0.4706 7.4 3nva-a1-m1-cA_3nva-a1-m1-cB
40 2dv6-a1-m1-cF 422 67 0.2041 0.0474 0.2985 7.7 2dv6-a1-m1-cB_2dv6-a1-m1-cF, 2dv6-a1-m1-cE_2dv6-a1-m1-cF
41 2dv6-a1-m1-cE 422 67 0.2041 0.0474 0.2985 7.7 2dv6-a1-m1-cE_2dv6-a1-m1-cF
42 2dv6-a1-m1-cB 422 67 0.2041 0.0474 0.2985 7.7 2dv6-a1-m1-cB_2dv6-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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