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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP
GVNPNNAAALPGKCGVSIPYKISASTNCATVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2alg-a6-m2-cB 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a6-m1-cB_2alg-a6-m2-cB
2 2alg-a6-m1-cB 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a6-m1-cB_2alg-a6-m2-cB
3 2alg-a5-m4-cA 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a5-m1-cB_2alg-a5-m4-cA
4 2alg-a5-m1-cB 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a5-m1-cB_2alg-a5-m4-cA
5 2alg-a4-m6-cA 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a4-m1-cB_2alg-a4-m6-cA
6 2alg-a4-m1-cB 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a4-m1-cB_2alg-a4-m6-cA
7 2alg-a3-m4-cA 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a3-m2-cB_2alg-a3-m4-cA
8 2alg-a3-m2-cB 92 92 1.0000 1.0000 1.0000 6.38e-61 2alg-a3-m2-cB_2alg-a3-m4-cA
9 7ksc-a6-m1-cD 93 92 0.6739 0.6667 0.6739 1.91e-39 7ksc-a6-m1-cB_7ksc-a6-m1-cD
10 7ksc-a6-m1-cB 93 92 0.6739 0.6667 0.6739 1.91e-39 7ksc-a6-m1-cB_7ksc-a6-m1-cD
11 1uva-a1-m2-cA 91 90 0.5217 0.5275 0.5333 3.69e-30 1uva-a1-m1-cA_1uva-a1-m2-cA
12 1uva-a1-m1-cA 91 90 0.5217 0.5275 0.5333 3.69e-30 1uva-a1-m1-cA_1uva-a1-m2-cA
13 7ksb-a3-m1-cB 92 90 0.4457 0.4457 0.4556 6.59e-25 7ksb-a3-m1-cA_7ksb-a3-m1-cB
14 7ksb-a3-m1-cA 92 90 0.4457 0.4457 0.4556 6.59e-25 7ksb-a3-m1-cA_7ksb-a3-m1-cB
15 6iwo-a1-m2-cA 92 90 0.4130 0.4130 0.4222 1.98e-22 6iwo-a1-m1-cB_6iwo-a1-m2-cA
16 6iwm-a1-m1-cA 92 90 0.4130 0.4130 0.4222 1.98e-22 6iwm-a1-m2-cB_6iwm-a1-m1-cA
17 6iwo-a1-m1-cB 90 90 0.4130 0.4222 0.4222 2.12e-22 6iwo-a1-m1-cB_6iwo-a1-m2-cA
18 6iwm-a1-m2-cB 90 90 0.4130 0.4222 0.4222 2.12e-22 6iwm-a1-m2-cB_6iwm-a1-m1-cA
19 4cvy-a2-m1-cD 235 33 0.1413 0.0553 0.3939 1.2 4cvy-a2-m1-cD_4cvy-a2-m1-cB
20 4ffa-a1-m1-cD 230 33 0.1413 0.0565 0.3939 1.2 4ffa-a1-m1-cD_4ffa-a1-m1-cC
21 4ffa-a1-m1-cC 234 33 0.1413 0.0556 0.3939 1.2 4ffa-a1-m1-cD_4ffa-a1-m1-cC
22 6eem-a1-m1-cB 487 40 0.1413 0.0267 0.3250 3.5 6eem-a1-m1-cA_6eem-a1-m1-cB
23 6eem-a1-m1-cA 487 40 0.1413 0.0267 0.3250 3.5 6eem-a1-m1-cA_6eem-a1-m1-cB
24 3l0g-a1-m1-cC 274 45 0.1630 0.0547 0.3333 5.7 3l0g-a1-m1-cC_3l0g-a1-m1-cD
25 3l0g-a3-m1-cD 274 45 0.1630 0.0547 0.3333 5.9 3l0g-a3-m1-cB_3l0g-a3-m1-cD
26 3l0g-a1-m1-cD 274 45 0.1630 0.0547 0.3333 5.9 3l0g-a1-m1-cC_3l0g-a1-m1-cD
27 3l0g-a3-m1-cB 273 45 0.1630 0.0549 0.3333 6.2 3l0g-a3-m1-cB_3l0g-a3-m1-cD
28 6liv-a2-m1-cD 482 65 0.1957 0.0373 0.2769 6.7 6liv-a2-m1-cD_6liv-a2-m1-cC
29 6liv-a2-m1-cC 484 65 0.1957 0.0372 0.2769 6.9 6liv-a2-m1-cD_6liv-a2-m1-cC
30 5mux-a3-m1-cF 468 38 0.1304 0.0256 0.3158 7.9 5mux-a3-m1-cF_5mux-a3-m1-cE
31 5mux-a3-m1-cE 472 38 0.1304 0.0254 0.3158 7.9 5mux-a3-m1-cF_5mux-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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