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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
MITVDITVNDEGKVTDVIMDGHAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSV
DTNNDEAQLILQTMLVSLQTIEEEYNNIRLNYK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4peo-a1-m1-cB 93 93 1.0000 1.0000 1.0000 3.97e-64 4peo-a1-m1-cA_4peo-a1-m1-cB
2 4peo-a1-m1-cA 92 93 0.9892 1.0000 0.9892 3.19e-61 4peo-a1-m1-cA_4peo-a1-m1-cB
3 7kld-a1-m2-cA 100 100 1.0000 0.9300 0.9300 1.23e-59 7kld-a1-m2-cA_7kld-a1-m2-cB
4 7kld-a1-m1-cA 100 100 1.0000 0.9300 0.9300 1.23e-59 7kld-a1-m1-cA_7kld-a1-m2-cB
5 7kld-a1-m2-cB 106 106 1.0000 0.8774 0.8774 2.33e-58 7kld-a1-m1-cA_7kld-a1-m2-cB, 7kld-a1-m2-cA_7kld-a1-m2-cB
6 4bjh-a1-m6-cA 422 59 0.1828 0.0403 0.2881 1.9 4bjh-a1-m2-cA_4bjh-a1-m6-cA, 4bjh-a1-m3-cA_4bjh-a1-m6-cA
7 4bjh-a1-m3-cA 422 59 0.1828 0.0403 0.2881 1.9 4bjh-a1-m3-cA_4bjh-a1-m6-cA
8 4bjh-a1-m2-cA 422 59 0.1828 0.0403 0.2881 1.9 4bjh-a1-m2-cA_4bjh-a1-m6-cA
9 7qfz-a2-m1-cC 289 38 0.1075 0.0346 0.2632 5.9 7qfz-a2-m1-cC_7qfz-a2-m1-cD
10 7qfz-a2-m1-cD 290 38 0.1075 0.0345 0.2632 5.9 7qfz-a2-m1-cC_7qfz-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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