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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MIVTTTSGIQGKEIIEYIDIVNGEAIMGAESKLKEARDIAMDEMKELAKQKGANAIVGVD
VDYEVVRDGMLMVAVSGTAVRI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vr4-a1-m1-cB 82 82 1.0000 1.0000 1.0000 2.57e-52 1vr4-a1-m1-cB_1vr4-a1-m1-cC
2 1vr4-a1-m1-cC 99 99 1.0000 0.8283 0.8283 8.86e-48 1vr4-a1-m1-cB_1vr4-a1-m1-cC
3 2gtc-a1-m1-cE 97 102 0.9146 0.7732 0.7353 2.40e-34 2gtc-a1-m1-cD_2gtc-a1-m1-cE
4 2gtc-a1-m1-cD 97 102 0.9146 0.7732 0.7353 2.40e-34 2gtc-a1-m1-cD_2gtc-a1-m1-cE
5 1y2i-a1-m1-cE 106 100 0.4634 0.3585 0.3800 1.81e-16 1y2i-a1-m1-cD_1y2i-a1-m1-cE
6 1y2i-a1-m1-cD 106 100 0.4634 0.3585 0.3800 1.81e-16 1y2i-a1-m1-cD_1y2i-a1-m1-cE
7 2v24-a1-m2-cA 197 32 0.1341 0.0558 0.3438 2.7 2v24-a1-m1-cA_2v24-a1-m2-cA
8 2v24-a1-m1-cA 197 32 0.1341 0.0558 0.3438 2.7 2v24-a1-m1-cA_2v24-a1-m2-cA
9 1rtr-a1-m1-cB 271 37 0.1707 0.0517 0.3784 4.3 1rtr-a1-m1-cB_1rtr-a1-m1-cA
10 1rtr-a1-m1-cA 277 37 0.1707 0.0505 0.3784 5.0 1rtr-a1-m1-cB_1rtr-a1-m1-cA
11 8dtc-a1-m1-cB 374 46 0.1951 0.0428 0.3478 7.9 8dtc-a1-m1-cA_8dtc-a1-m1-cB
12 8dtc-a1-m1-cA 374 46 0.1951 0.0428 0.3478 7.9 8dtc-a1-m1-cA_8dtc-a1-m1-cB
13 1rqi-a1-m1-cB 298 47 0.1829 0.0503 0.3191 8.7 1rqi-a1-m1-cB_1rqi-a1-m1-cA
14 1rqi-a1-m1-cA 300 47 0.1829 0.0500 0.3191 9.5 1rqi-a1-m1-cB_1rqi-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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