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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQ
ACRLRKCYEVGMMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hcq-a2-m1-cE 74 74 1.0000 1.0000 1.0000 5.26e-52 1hcq-a2-m1-cF_1hcq-a2-m1-cE
2 1hcq-a2-m1-cF 71 73 0.9595 1.0000 0.9726 2.97e-47 1hcq-a2-m1-cF_1hcq-a2-m1-cE
3 4oln-a1-m1-cA 70 71 0.7703 0.8143 0.8028 1.11e-36 4oln-a1-m1-cB_4oln-a1-m1-cA
4 4oln-a1-m1-cB 67 68 0.7568 0.8358 0.8235 2.71e-36 4oln-a1-m1-cB_4oln-a1-m1-cA
5 8ifo-a1-m1-cA 76 70 0.6757 0.6579 0.7143 7.15e-33 8ifo-a1-m1-cA_8ifo-a1-m1-cB
6 8ifo-a1-m1-cB 80 70 0.6757 0.6250 0.7143 8.63e-33 8ifo-a1-m1-cA_8ifo-a1-m1-cB
7 1r4i-a1-m1-cA 74 68 0.5270 0.5270 0.5735 5.62e-25 1r4i-a1-m1-cB_1r4i-a1-m1-cA
8 1r4i-a1-m1-cB 71 68 0.5270 0.5493 0.5735 5.79e-25 1r4i-a1-m1-cB_1r4i-a1-m1-cA
9 2c7a-a1-m1-cB 76 69 0.5000 0.4868 0.5362 6.33e-24 2c7a-a1-m1-cB_2c7a-a1-m1-cA
10 2c7a-a1-m1-cA 78 69 0.5000 0.4744 0.5362 7.06e-24 2c7a-a1-m1-cB_2c7a-a1-m1-cA
11 7xv6-a1-m1-cB 77 69 0.5135 0.4935 0.5507 1.56e-22 7xv6-a1-m1-cB_7xv6-a1-m1-cA
12 6l6l-a1-m1-cA 85 69 0.5135 0.4471 0.5507 1.64e-22 6l6l-a1-m1-cB_6l6l-a1-m1-cA
13 7xv9-a1-m1-cB 80 69 0.5135 0.4750 0.5507 1.67e-22 7xv9-a1-m1-cA_7xv9-a1-m1-cB
14 7xv9-a1-m1-cA 80 69 0.5135 0.4750 0.5507 1.67e-22 7xv9-a1-m1-cA_7xv9-a1-m1-cB
15 6l6l-a1-m1-cB 84 69 0.5135 0.4524 0.5507 1.69e-22 6l6l-a1-m1-cB_6l6l-a1-m1-cA
16 7xv6-a1-m1-cA 84 69 0.5135 0.4524 0.5507 1.93e-22 7xv6-a1-m1-cB_7xv6-a1-m1-cA
17 6fbq-a1-m1-cB 81 68 0.4730 0.4321 0.5147 1.67e-20 6fbq-a1-m1-cA_6fbq-a1-m1-cB
18 6fbq-a1-m1-cA 80 68 0.4730 0.4375 0.5147 1.96e-20 6fbq-a1-m1-cA_6fbq-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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