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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNV
VKLSAEGDDEEEAIKALVDLIESKFGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3le5-a2-m3-cB 87 87 1.0000 1.0000 1.0000 2.11e-58 3le5-a2-m1-cB_3le5-a2-m3-cB
2 3le5-a2-m1-cB 87 87 1.0000 1.0000 1.0000 2.11e-58 3le5-a2-m1-cB_3le5-a2-m3-cB
3 2hpr-a2-m2-cA 86 83 0.4138 0.4186 0.4337 3.52e-21 2hpr-a2-m1-cA_2hpr-a2-m2-cA
4 2hpr-a2-m1-cA 86 83 0.4138 0.4186 0.4337 3.52e-21 2hpr-a2-m1-cA_2hpr-a2-m2-cA
5 1sph-a1-m1-cB 87 84 0.4253 0.4253 0.4405 1.55e-20 1sph-a1-m1-cA_1sph-a1-m1-cB
6 1sph-a1-m1-cA 87 84 0.4253 0.4253 0.4405 1.55e-20 1sph-a1-m1-cA_1sph-a1-m1-cB
7 3ccd-a1-m1-cB 85 80 0.4368 0.4471 0.4750 6.16e-19 3ccd-a1-m1-cA_3ccd-a1-m1-cB
8 3ccd-a1-m1-cA 85 80 0.4368 0.4471 0.4750 6.16e-19 3ccd-a1-m1-cA_3ccd-a1-m1-cB
9 1y50-a2-m4-cA 87 62 0.3563 0.3563 0.5000 2.21e-17 1y50-a2-m2-cA_1y50-a2-m4-cA, 1y50-a2-m3-cA_1y50-a2-m4-cA
10 1y50-a2-m3-cA 87 62 0.3563 0.3563 0.5000 2.21e-17 1y50-a2-m3-cA_1y50-a2-m4-cA
11 1y50-a2-m2-cA 87 62 0.3563 0.3563 0.5000 2.21e-17 1y50-a2-m2-cA_1y50-a2-m4-cA
12 4ojd-a1-m3-cH 444 45 0.1609 0.0315 0.3111 2.7 4ojd-a1-m2-cH_4ojd-a1-m3-cH
13 4ojd-a1-m2-cH 444 45 0.1609 0.0315 0.3111 2.7 4ojd-a1-m2-cH_4ojd-a1-m3-cH
14 6lnh-a1-m1-cD 211 33 0.1149 0.0474 0.3030 2.7 6lnh-a1-m1-cD_6lnh-a1-m1-cB, 6lnh-a1-m1-cD_6lnh-a1-m1-cC
15 6lnh-a1-m1-cC 228 33 0.1149 0.0439 0.3030 3.2 6lnh-a1-m1-cD_6lnh-a1-m1-cC
16 4eqy-a1-m1-cB 261 22 0.1264 0.0421 0.5000 3.2 4eqy-a1-m1-cA_4eqy-a1-m1-cB
17 4eqy-a1-m1-cA 261 22 0.1264 0.0421 0.5000 3.2 4eqy-a1-m1-cA_4eqy-a1-m1-cB
18 6lnh-a1-m1-cB 223 33 0.1149 0.0448 0.3030 3.2 6lnh-a1-m1-cD_6lnh-a1-m1-cB
19 8bbp-a1-m1-cB 346 30 0.1264 0.0318 0.3667 4.5 8bbp-a1-m1-cA_8bbp-a1-m1-cB
20 6t7j-a2-m3-cD 629 32 0.1264 0.0175 0.3438 4.9 6t7j-a2-m3-cD_6t7j-a2-m1-cA
21 6t7j-a2-m1-cA 631 32 0.1264 0.0174 0.3438 5.0 6t7j-a2-m3-cD_6t7j-a2-m1-cA
22 4zg5-a1-m1-cD 252 30 0.1264 0.0437 0.3667 5.3 4zg5-a1-m1-cG_4zg5-a1-m1-cD
23 4zg5-a1-m1-cG 247 30 0.1264 0.0445 0.3667 5.4 4zg5-a1-m1-cA_4zg5-a1-m1-cG, 4zg5-a1-m1-cG_4zg5-a1-m1-cD
24 4zg5-a1-m1-cA 247 30 0.1264 0.0445 0.3667 5.6 4zg5-a1-m1-cA_4zg5-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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