Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=53)
MKINLRLEQFKKELVLYEQKKFKEYGMKIDEITKENKKLANEIGRLRERWDSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kc1-a2-m1-cF 61 53 1.0000 0.8689 1.0000 5.03e-32 5kc1-a2-m1-cH_5kc1-a2-m1-cF
2 5kc1-a2-m1-cH 53 53 1.0000 1.0000 1.0000 9.28e-32 5kc1-a2-m1-cH_5kc1-a2-m1-cF
3 1q4t-a1-m2-cA 142 37 0.2830 0.1056 0.4054 0.16 1q4t-a1-m2-cB_1q4t-a1-m2-cA
4 1q4t-a1-m1-cA 142 37 0.2830 0.1056 0.4054 0.16 1q4t-a1-m2-cB_1q4t-a1-m1-cA
5 1q4u-a1-m2-cB 139 37 0.2830 0.1079 0.4054 0.16 1q4u-a1-m1-cB_1q4u-a1-m2-cB
6 1q4u-a1-m1-cB 139 37 0.2830 0.1079 0.4054 0.16 1q4u-a1-m1-cB_1q4u-a1-m2-cB
7 1q4t-a1-m2-cB 140 37 0.2830 0.1071 0.4054 0.17 1q4t-a1-m2-cB_1q4t-a1-m1-cA, 1q4t-a1-m2-cB_1q4t-a1-m2-cA
8 3ces-a2-m1-cC 516 36 0.1887 0.0194 0.2778 1.1 3ces-a2-m1-cD_3ces-a2-m1-cC
9 3fxu-a1-m2-cB 267 49 0.3019 0.0599 0.3265 1.3 3fxu-a1-m2-cB_3fxu-a1-m1-cA, 3fxu-a1-m2-cB_3fxu-a1-m2-cA
10 3ces-a2-m1-cD 507 49 0.2453 0.0256 0.2653 1.3 3ces-a2-m1-cD_3ces-a2-m1-cC
11 3fzj-a3-m2-cJ 296 20 0.1698 0.0304 0.4500 1.6 3fzj-a3-m1-cI_3fzj-a3-m2-cJ
12 3fzj-a3-m1-cI 296 20 0.1698 0.0304 0.4500 1.6 3fzj-a3-m1-cI_3fzj-a3-m2-cJ
13 3fzj-a2-m1-cH 296 20 0.1698 0.0304 0.4500 1.6 3fzj-a2-m1-cE_3fzj-a2-m1-cH
14 3fzj-a2-m1-cE 296 20 0.1698 0.0304 0.4500 1.6 3fzj-a2-m1-cE_3fzj-a2-m1-cH
15 3fxu-a1-m2-cA 296 20 0.1698 0.0304 0.4500 1.6 3fxu-a1-m2-cB_3fxu-a1-m2-cA
16 3fxu-a1-m1-cA 296 20 0.1698 0.0304 0.4500 1.6 3fxu-a1-m2-cB_3fxu-a1-m1-cA
17 3l4g-a2-m1-cH 589 24 0.1698 0.0153 0.3750 1.9 3l4g-a2-m1-cF_3l4g-a2-m1-cH
18 3l4g-a2-m1-cF 589 24 0.1698 0.0153 0.3750 1.9 3l4g-a2-m1-cF_3l4g-a2-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600