Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFDFLPKVKIEIVVPDDIVDTCVDTI
IRTAQTGKIGDGKIFVFDVARVIRIRTGEEDD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5l9n-a1-m3-cA 92 92 1.0000 1.0000 1.0000 1.60e-58 5l9n-a1-m2-cA_5l9n-a1-m3-cA
2 5l9n-a1-m2-cA 92 92 1.0000 1.0000 1.0000 1.60e-58 5l9n-a1-m2-cA_5l9n-a1-m3-cA
3 2pii-a1-m3-cA 112 109 1.0000 0.8214 0.8440 1.64e-54 2pii-a1-m2-cA_2pii-a1-m3-cA
4 2pii-a1-m2-cA 112 109 1.0000 0.8214 0.8440 1.64e-54 2pii-a1-m2-cA_2pii-a1-m3-cA
5 2eg2-a2-m9-cA 95 89 0.7065 0.6842 0.7303 7.97e-40 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
6 2eg2-a2-m6-cA 95 89 0.7065 0.6842 0.7303 7.97e-40 2eg2-a2-m6-cA_2eg2-a2-m9-cA
7 2eg2-a2-m5-cA 95 89 0.7065 0.6842 0.7303 7.97e-40 2eg2-a2-m5-cA_2eg2-a2-m9-cA
8 2gw8-a1-m3-cA 99 95 0.7065 0.6566 0.6842 8.69e-40 2gw8-a1-m2-cA_2gw8-a1-m3-cA
9 2gw8-a1-m2-cA 99 95 0.7065 0.6566 0.6842 8.69e-40 2gw8-a1-m2-cA_2gw8-a1-m3-cA
10 2gnk-a2-m3-cA 95 92 0.6413 0.6211 0.6413 3.07e-37 2gnk-a2-m2-cA_2gnk-a2-m3-cA
11 2gnk-a2-m2-cA 95 92 0.6413 0.6211 0.6413 3.07e-37 2gnk-a2-m2-cA_2gnk-a2-m3-cA
12 4cnz-a1-m1-cB 100 96 0.6196 0.5700 0.5938 6.21e-35 4cnz-a1-m1-cA_4cnz-a1-m1-cB
13 4cnz-a1-m1-cA 100 96 0.6196 0.5700 0.5938 6.21e-35 4cnz-a1-m1-cA_4cnz-a1-m1-cB
14 1hwu-a3-m2-cD 99 93 0.7283 0.6768 0.7204 9.35e-35 1hwu-a3-m1-cA_1hwu-a3-m2-cD
15 1hwu-a3-m1-cA 99 93 0.7283 0.6768 0.7204 1.07e-34 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
16 4c3l-a1-m3-cA 89 89 0.6304 0.6517 0.6517 5.37e-34 4c3l-a1-m2-cA_4c3l-a1-m3-cA
17 4c3l-a1-m2-cA 89 89 0.6304 0.6517 0.6517 5.37e-34 4c3l-a1-m2-cA_4c3l-a1-m3-cA
18 2nuu-a4-m2-cK 112 109 0.6413 0.5268 0.5413 1.14e-33 2nuu-a4-m1-cH_2nuu-a4-m2-cK
19 2nuu-a4-m1-cH 112 109 0.6413 0.5268 0.5413 1.14e-33 2nuu-a4-m1-cH_2nuu-a4-m2-cK
20 2ns1-a1-m3-cB 113 109 0.6413 0.5221 0.5413 1.40e-33 2ns1-a1-m2-cB_2ns1-a1-m3-cB
21 2ns1-a1-m2-cB 113 109 0.6413 0.5221 0.5413 1.40e-33 2ns1-a1-m2-cB_2ns1-a1-m3-cB
22 1ul3-a3-m5-cA 95 91 0.6087 0.5895 0.6154 2.18e-33 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
23 4co2-a2-m3-cA 112 108 0.6196 0.5089 0.5278 3.42e-33 4co2-a2-m2-cA_4co2-a2-m3-cA
24 4co2-a2-m2-cA 112 108 0.6196 0.5089 0.5278 3.42e-33 4co2-a2-m2-cA_4co2-a2-m3-cA
25 3bzq-a1-m3-cA 99 92 0.5761 0.5354 0.5761 6.76e-32 3bzq-a1-m2-cA_3bzq-a1-m3-cA
26 3bzq-a1-m2-cA 99 92 0.5761 0.5354 0.5761 6.76e-32 3bzq-a1-m2-cA_3bzq-a1-m3-cA
27 3lf0-a1-m1-cC 101 95 0.5761 0.5248 0.5579 1.28e-31 3lf0-a1-m1-cC_3lf0-a1-m1-cB
28 1hwu-a3-m2-cF 91 89 0.6848 0.6923 0.7079 2.46e-31 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
29 1ul3-a2-m3-cD 95 93 0.6087 0.5895 0.6022 2.70e-31 1ul3-a2-m2-cD_1ul3-a2-m3-cD
30 1ul3-a2-m2-cD 95 93 0.6087 0.5895 0.6022 2.70e-31 1ul3-a2-m2-cD_1ul3-a2-m3-cD
31 2xul-a1-m1-cA 106 101 0.6304 0.5472 0.5743 2.79e-31 2xul-a1-m1-cA_2xul-a1-m1-cC
32 1ul3-a3-m4-cB 94 91 0.6087 0.5957 0.6154 2.90e-31 1ul3-a3-m4-cB_1ul3-a3-m5-cA
33 1ul3-a3-m1-cC 94 91 0.6087 0.5957 0.6154 2.90e-31 1ul3-a3-m1-cC_1ul3-a3-m5-cA
34 2xul-a1-m1-cC 107 102 0.6304 0.5421 0.5686 3.50e-31 2xul-a1-m1-cA_2xul-a1-m1-cC
35 3n5b-a1-m3-cA 112 108 0.6304 0.5179 0.5370 3.82e-31 3n5b-a1-m2-cA_3n5b-a1-m3-cA
36 3n5b-a1-m2-cA 112 108 0.6304 0.5179 0.5370 3.82e-31 3n5b-a1-m2-cA_3n5b-a1-m3-cA
37 1hwu-a3-m2-cE 84 88 0.6739 0.7381 0.7045 8.40e-31 1hwu-a3-m2-cE_1hwu-a3-m2-cF
38 3lf0-a1-m1-cB 112 105 0.5761 0.4732 0.5048 6.49e-30 3lf0-a1-m1-cC_3lf0-a1-m1-cB
39 3t9z-a2-m1-cF 94 91 0.5326 0.5213 0.5385 1.60e-27 3t9z-a2-m1-cD_3t9z-a2-m1-cF
40 2o66-a2-m2-cC 106 91 0.5217 0.4528 0.5275 1.97e-27 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
41 3t9z-a2-m1-cD 93 91 0.5326 0.5269 0.5385 2.14e-27 3t9z-a2-m1-cD_3t9z-a2-m1-cF
42 2o66-a2-m2-cA 107 93 0.5109 0.4393 0.5054 3.18e-26 2o66-a2-m2-cC_2o66-a2-m2-cA
43 2o66-a2-m1-cA 107 93 0.5109 0.4393 0.5054 3.18e-26 2o66-a2-m2-cC_2o66-a2-m1-cA
44 7p4v-a1-m3-cA 113 109 0.5326 0.4336 0.4495 6.57e-25 7p4v-a1-m2-cA_7p4v-a1-m3-cA
45 7p4v-a1-m2-cA 113 109 0.5326 0.4336 0.4495 6.57e-25 7p4v-a1-m2-cA_7p4v-a1-m3-cA
46 7p52-a1-m3-cA 111 106 0.5543 0.4595 0.4811 1.10e-24 7p52-a1-m2-cA_7p52-a1-m3-cA
47 7p52-a1-m2-cA 111 106 0.5543 0.4595 0.4811 1.10e-24 7p52-a1-m2-cA_7p52-a1-m3-cA
48 1v3r-a1-m1-cA 92 92 0.4674 0.4674 0.4674 2.17e-24 1v3r-a1-m1-cC_1v3r-a1-m1-cA
49 3ncp-a6-m4-cC 100 96 0.5543 0.5100 0.5312 2.42e-24 3ncp-a6-m5-cD_3ncp-a6-m4-cC
50 3ncp-a6-m5-cD 99 96 0.5543 0.5152 0.5312 2.44e-24 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
51 3ncp-a6-m4-cD 99 96 0.5543 0.5152 0.5312 2.44e-24 3ncp-a6-m4-cD_3ncp-a6-m5-cD
52 3ta2-a2-m5-cB 109 108 0.5435 0.4587 0.4630 3.81e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
53 3ta2-a2-m4-cB 109 108 0.5435 0.4587 0.4630 3.81e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
54 2rd5-a1-m3-cD 126 108 0.5109 0.3730 0.4352 1.11e-23 2rd5-a1-m2-cD_2rd5-a1-m3-cD
55 2rd5-a1-m2-cD 126 108 0.5109 0.3730 0.4352 1.11e-23 2rd5-a1-m2-cD_2rd5-a1-m3-cD
56 7p50-a1-m1-cC 115 106 0.5000 0.4000 0.4340 2.25e-22 7p50-a1-m1-cB_7p50-a1-m1-cC
57 7p50-a1-m1-cB 115 106 0.5000 0.4000 0.4340 2.25e-22 7p50-a1-m1-cB_7p50-a1-m1-cC
58 1v3r-a1-m1-cC 90 91 0.4674 0.4778 0.4725 6.19e-22 1v3r-a1-m1-cC_1v3r-a1-m1-cA
59 1ufl-a2-m2-cC 99 99 0.4674 0.4343 0.4343 1.69e-21 1ufl-a2-m2-cC_1ufl-a2-m1-cA
60 3l7p-a1-m1-cB 88 88 0.4783 0.5000 0.5000 2.41e-20 3l7p-a1-m1-cB_3l7p-a1-m1-cF
61 1ufl-a2-m1-cA 108 108 0.4674 0.3981 0.3981 1.45e-19 1ufl-a2-m2-cC_1ufl-a2-m1-cA
62 3l7p-a1-m1-cF 88 87 0.4674 0.4886 0.4943 1.63e-19 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
63 3l7p-a1-m1-cC 91 91 0.4783 0.4835 0.4835 1.00e-17 3l7p-a1-m1-cF_3l7p-a1-m1-cC
64 7o4x-a1-m3-cA 103 97 0.3696 0.3301 0.3505 6.85e-16 7o4x-a1-m2-cA_7o4x-a1-m3-cA
65 7o4x-a1-m2-cA 103 97 0.3696 0.3301 0.3505 6.85e-16 7o4x-a1-m2-cA_7o4x-a1-m3-cA
66 4usj-a1-m3-cD 142 105 0.4783 0.3099 0.4190 2.86e-15 4usj-a1-m2-cD_4usj-a1-m3-cD
67 4usj-a1-m2-cD 142 105 0.4783 0.3099 0.4190 2.86e-15 4usj-a1-m2-cD_4usj-a1-m3-cD
68 4r25-a1-m3-cA 114 107 0.3804 0.3070 0.3271 8.01e-15 4r25-a1-m2-cA_4r25-a1-m3-cA
69 4r25-a1-m2-cA 114 107 0.3804 0.3070 0.3271 8.01e-15 4r25-a1-m2-cA_4r25-a1-m3-cA
70 4ozn-a1-m1-cC 113 99 0.4783 0.3894 0.4444 9.00e-15 4ozn-a1-m1-cC_4ozn-a1-m1-cA
71 4ozn-a1-m1-cA 116 103 0.4783 0.3793 0.4272 3.54e-14 4ozn-a1-m1-cC_4ozn-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600