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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
MKKLREEAAKLFEEWKKLAEEAAKLLEGGGGGGGGELMKLCEEAAKKAEELFKLAEERLK
KL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jst-a1-m1-cB 62 62 1.0000 1.0000 1.0000 1.90e-32 2jst-a1-m1-cA_2jst-a1-m1-cB
2 2jst-a1-m1-cA 62 62 1.0000 1.0000 1.0000 1.90e-32 2jst-a1-m1-cA_2jst-a1-m1-cB
3 2i7u-a1-m1-cB 62 62 1.0000 1.0000 1.0000 1.90e-32 2i7u-a1-m1-cA_2i7u-a1-m1-cB
4 2i7u-a1-m1-cA 62 62 1.0000 1.0000 1.0000 1.90e-32 2i7u-a1-m1-cA_2i7u-a1-m1-cB
5 1m3w-a1-m1-cD 30 30 0.3387 0.7000 0.7000 4.44e-05 1m3w-a1-m1-cB_1m3w-a1-m1-cD, 1m3w-a1-m1-cC_1m3w-a1-m1-cD
6 1m3w-a1-m1-cC 30 30 0.3387 0.7000 0.7000 4.44e-05 1m3w-a1-m1-cC_1m3w-a1-m1-cD
7 1m3w-a1-m1-cB 30 30 0.3387 0.7000 0.7000 4.44e-05 1m3w-a1-m1-cB_1m3w-a1-m1-cD
8 5j10-a1-m1-cB 70 50 0.3065 0.2714 0.3800 0.009 5j10-a1-m1-cA_5j10-a1-m1-cB
9 5j10-a1-m1-cA 70 50 0.3065 0.2714 0.3800 0.009 5j10-a1-m1-cA_5j10-a1-m1-cB
10 5cn0-a1-m3-cA 70 39 0.3226 0.2857 0.5128 0.053 5cn0-a1-m2-cA_5cn0-a1-m3-cA
11 5cn0-a1-m2-cA 70 39 0.3226 0.2857 0.5128 0.053 5cn0-a1-m2-cA_5cn0-a1-m3-cA
12 4lb8-a1-m2-cA 265 27 0.2097 0.0491 0.4815 4.0 4lb8-a1-m1-cA_4lb8-a1-m2-cA
13 4lb8-a1-m1-cA 265 27 0.2097 0.0491 0.4815 4.0 4lb8-a1-m1-cA_4lb8-a1-m2-cA
14 1azw-a1-m1-cB 313 51 0.2258 0.0447 0.2745 7.2 1azw-a1-m1-cA_1azw-a1-m1-cB
15 1azw-a1-m1-cA 313 51 0.2258 0.0447 0.2745 7.2 1azw-a1-m1-cA_1azw-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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