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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
MKKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWA
AFEDKNLPEGYARVTAVLPEHQAYIVRKWEADAKKKQET

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2n5g-a1-m1-cB 101 99 1.0000 0.9802 1.0000 2.51e-69 2n5g-a1-m1-cA_2n5g-a1-m1-cB
2 2n5g-a1-m1-cA 101 99 1.0000 0.9802 1.0000 2.51e-69 2n5g-a1-m1-cA_2n5g-a1-m1-cB
3 5ckt-a2-m1-cC 99 99 1.0000 1.0000 1.0000 2.65e-69 5ckt-a2-m1-cB_5ckt-a2-m1-cC
4 5ckt-a2-m1-cB 99 99 1.0000 1.0000 1.0000 2.65e-69 5ckt-a2-m1-cB_5ckt-a2-m1-cC
5 2w7n-a1-m1-cB 95 95 0.9596 1.0000 1.0000 4.57e-66 2w7n-a1-m1-cA_2w7n-a1-m1-cB
6 2w7n-a1-m1-cA 94 94 0.9495 1.0000 1.0000 2.04e-65 2w7n-a1-m1-cA_2w7n-a1-m1-cB
7 7bbq-a1-m2-cA 92 74 0.3434 0.3696 0.4595 1.76e-06 7bbq-a1-m1-cA_7bbq-a1-m2-cA
8 7bbq-a1-m1-cA 92 74 0.3434 0.3696 0.4595 1.76e-06 7bbq-a1-m1-cA_7bbq-a1-m2-cA
9 5i10-a2-m2-cA 192 64 0.2121 0.1094 0.3281 1.8 5i10-a2-m1-cA_5i10-a2-m2-cA
10 5i10-a2-m1-cA 192 64 0.2121 0.1094 0.3281 1.8 5i10-a2-m1-cA_5i10-a2-m2-cA
11 2do6-a1-m1-cB 53 22 0.0909 0.1698 0.4091 3.5 2do6-a1-m1-cA_2do6-a1-m1-cB
12 2do6-a1-m1-cA 53 22 0.0909 0.1698 0.4091 3.5 2do6-a1-m1-cA_2do6-a1-m1-cB
13 8df2-a1-m1-cD 374 43 0.1414 0.0374 0.3256 6.1 8df2-a1-m1-cA_8df2-a1-m1-cD, 8df2-a1-m1-cB_8df2-a1-m1-cD, 8df2-a1-m1-cC_8df2-a1-m1-cD
14 8df2-a1-m1-cB 374 43 0.1414 0.0374 0.3256 6.1 8df2-a1-m1-cB_8df2-a1-m1-cD
15 8df2-a1-m1-cA 374 43 0.1414 0.0374 0.3256 6.1 8df2-a1-m1-cA_8df2-a1-m1-cD
16 8df2-a1-m1-cC 374 43 0.1414 0.0374 0.3256 6.4 8df2-a1-m1-cC_8df2-a1-m1-cD
17 6iud-a1-m1-cD 264 30 0.1010 0.0379 0.3333 6.8 6iud-a1-m1-cC_6iud-a1-m1-cD
18 6iud-a1-m1-cC 264 30 0.1010 0.0379 0.3333 6.8 6iud-a1-m1-cC_6iud-a1-m1-cD
19 4fn0-a1-m2-cA 220 33 0.1313 0.0591 0.3939 8.2 4fn0-a1-m1-cA_4fn0-a1-m2-cA
20 4fn0-a1-m1-cA 220 33 0.1313 0.0591 0.3939 8.2 4fn0-a1-m1-cA_4fn0-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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