Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=95)
MKKVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGREFLQKLKIEIVVDEGQVDMVVD
KLVSAARTGEIGDGKIFISPVDSVVRIRTGEKDTE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1ul3-a2-m3-cD 95 95 1.0000 1.0000 1.0000 1.50e-61 1ul3-a2-m2-cD_1ul3-a2-m3-cD
2 1ul3-a2-m2-cD 95 95 1.0000 1.0000 1.0000 1.50e-61 1ul3-a2-m2-cD_1ul3-a2-m3-cD
3 1ul3-a3-m5-cA 95 95 0.9789 0.9789 0.9789 4.88e-58 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
4 1ul3-a3-m4-cB 94 95 0.9684 0.9787 0.9684 3.73e-57 1ul3-a3-m4-cB_1ul3-a3-m5-cA
5 1ul3-a3-m1-cC 94 95 0.9684 0.9787 0.9684 3.73e-57 1ul3-a3-m1-cC_1ul3-a3-m5-cA
6 3n5b-a1-m3-cA 112 110 0.8842 0.7500 0.7636 2.68e-52 3n5b-a1-m2-cA_3n5b-a1-m3-cA
7 3n5b-a1-m2-cA 112 110 0.8842 0.7500 0.7636 2.68e-52 3n5b-a1-m2-cA_3n5b-a1-m3-cA
8 2xul-a1-m1-cA 106 103 0.8316 0.7453 0.7670 7.04e-51 2xul-a1-m1-cA_2xul-a1-m1-cC
9 2xul-a1-m1-cC 107 104 0.8316 0.7383 0.7596 9.87e-51 2xul-a1-m1-cA_2xul-a1-m1-cC
10 4c3l-a1-m3-cA 89 91 0.8000 0.8539 0.8352 8.97e-49 4c3l-a1-m2-cA_4c3l-a1-m3-cA
11 4c3l-a1-m2-cA 89 91 0.8000 0.8539 0.8352 8.97e-49 4c3l-a1-m2-cA_4c3l-a1-m3-cA
12 3bzq-a1-m3-cA 99 92 0.5789 0.5556 0.5978 5.85e-38 3bzq-a1-m2-cA_3bzq-a1-m3-cA
13 3bzq-a1-m2-cA 99 92 0.5789 0.5556 0.5978 5.85e-38 3bzq-a1-m2-cA_3bzq-a1-m3-cA
14 3lf0-a1-m1-cC 101 95 0.5789 0.5446 0.5789 4.66e-36 3lf0-a1-m1-cC_3lf0-a1-m1-cB
15 3lf0-a1-m1-cB 112 106 0.5789 0.4911 0.5189 2.91e-34 3lf0-a1-m1-cC_3lf0-a1-m1-cB
16 2gw8-a1-m3-cA 99 93 0.5789 0.5556 0.5914 4.98e-33 2gw8-a1-m2-cA_2gw8-a1-m3-cA
17 2gw8-a1-m2-cA 99 93 0.5789 0.5556 0.5914 4.98e-33 2gw8-a1-m2-cA_2gw8-a1-m3-cA
18 2eg2-a2-m9-cA 95 92 0.6211 0.6211 0.6413 1.39e-32 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
19 2eg2-a2-m6-cA 95 92 0.6211 0.6211 0.6413 1.39e-32 2eg2-a2-m6-cA_2eg2-a2-m9-cA
20 2eg2-a2-m5-cA 95 92 0.6211 0.6211 0.6413 1.39e-32 2eg2-a2-m5-cA_2eg2-a2-m9-cA
21 5l9n-a1-m3-cA 92 93 0.5895 0.6087 0.6022 2.79e-31 5l9n-a1-m2-cA_5l9n-a1-m3-cA
22 5l9n-a1-m2-cA 92 93 0.5895 0.6087 0.6022 2.79e-31 5l9n-a1-m2-cA_5l9n-a1-m3-cA
23 4cnz-a1-m1-cB 100 98 0.5895 0.5600 0.5714 3.11e-31 4cnz-a1-m1-cA_4cnz-a1-m1-cB
24 4cnz-a1-m1-cA 100 98 0.5895 0.5600 0.5714 3.11e-31 4cnz-a1-m1-cA_4cnz-a1-m1-cB
25 2pii-a1-m3-cA 112 108 0.6105 0.5179 0.5370 5.65e-31 2pii-a1-m2-cA_2pii-a1-m3-cA
26 2pii-a1-m2-cA 112 108 0.6105 0.5179 0.5370 5.65e-31 2pii-a1-m2-cA_2pii-a1-m3-cA
27 2o66-a2-m2-cA 107 91 0.5368 0.4766 0.5604 6.76e-30 2o66-a2-m2-cC_2o66-a2-m2-cA
28 2o66-a2-m1-cA 107 91 0.5368 0.4766 0.5604 6.76e-30 2o66-a2-m2-cC_2o66-a2-m1-cA
29 4co2-a2-m3-cA 112 110 0.5895 0.5000 0.5091 2.02e-29 4co2-a2-m2-cA_4co2-a2-m3-cA
30 4co2-a2-m2-cA 112 110 0.5895 0.5000 0.5091 2.02e-29 4co2-a2-m2-cA_4co2-a2-m3-cA
31 2o66-a2-m2-cC 106 90 0.5263 0.4717 0.5556 4.61e-29 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
32 7p4v-a1-m3-cA 113 110 0.6000 0.5044 0.5182 7.57e-28 7p4v-a1-m2-cA_7p4v-a1-m3-cA
33 7p4v-a1-m2-cA 113 110 0.6000 0.5044 0.5182 7.57e-28 7p4v-a1-m2-cA_7p4v-a1-m3-cA
34 1hwu-a3-m1-cA 99 93 0.5789 0.5556 0.5914 1.96e-27 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
35 2rd5-a1-m3-cD 126 106 0.5368 0.4048 0.4811 2.69e-27 2rd5-a1-m2-cD_2rd5-a1-m3-cD
36 2rd5-a1-m2-cD 126 106 0.5368 0.4048 0.4811 2.69e-27 2rd5-a1-m2-cD_2rd5-a1-m3-cD
37 2gnk-a2-m3-cA 95 93 0.5263 0.5263 0.5376 3.49e-27 2gnk-a2-m2-cA_2gnk-a2-m3-cA
38 2gnk-a2-m2-cA 95 93 0.5263 0.5263 0.5376 3.49e-27 2gnk-a2-m2-cA_2gnk-a2-m3-cA
39 3t9z-a2-m1-cF 94 93 0.5474 0.5532 0.5591 1.81e-26 3t9z-a2-m1-cD_3t9z-a2-m1-cF
40 2nuu-a4-m2-cK 112 108 0.5368 0.4554 0.4722 2.06e-26 2nuu-a4-m1-cH_2nuu-a4-m2-cK
41 2nuu-a4-m1-cH 112 108 0.5368 0.4554 0.4722 2.06e-26 2nuu-a4-m1-cH_2nuu-a4-m2-cK
42 3t9z-a2-m1-cD 93 93 0.5474 0.5591 0.5591 2.15e-26 3t9z-a2-m1-cD_3t9z-a2-m1-cF
43 2ns1-a1-m3-cB 113 108 0.5368 0.4513 0.4722 2.37e-26 2ns1-a1-m2-cB_2ns1-a1-m3-cB
44 2ns1-a1-m2-cB 113 108 0.5368 0.4513 0.4722 2.37e-26 2ns1-a1-m2-cB_2ns1-a1-m3-cB
45 1hwu-a3-m2-cD 99 93 0.5684 0.5455 0.5806 3.37e-26 1hwu-a3-m1-cA_1hwu-a3-m2-cD
46 7p52-a1-m3-cA 111 109 0.6211 0.5315 0.5413 3.86e-26 7p52-a1-m2-cA_7p52-a1-m3-cA
47 7p52-a1-m2-cA 111 109 0.6211 0.5315 0.5413 3.86e-26 7p52-a1-m2-cA_7p52-a1-m3-cA
48 7p50-a1-m1-cC 115 107 0.5895 0.4870 0.5234 4.00e-26 7p50-a1-m1-cB_7p50-a1-m1-cC
49 7p50-a1-m1-cB 115 107 0.5895 0.4870 0.5234 4.00e-26 7p50-a1-m1-cB_7p50-a1-m1-cC
50 3l7p-a1-m1-cB 88 89 0.5053 0.5455 0.5393 7.83e-26 3l7p-a1-m1-cB_3l7p-a1-m1-cF
51 3l7p-a1-m1-cF 88 88 0.4947 0.5341 0.5341 4.71e-25 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
52 3ncp-a6-m4-cC 100 94 0.5474 0.5200 0.5532 7.08e-25 3ncp-a6-m5-cD_3ncp-a6-m4-cC
53 3ncp-a6-m5-cD 99 94 0.5474 0.5253 0.5532 8.67e-25 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
54 3ncp-a6-m4-cD 99 94 0.5474 0.5253 0.5532 8.67e-25 3ncp-a6-m4-cD_3ncp-a6-m5-cD
55 3ta2-a2-m5-cB 109 108 0.5474 0.4771 0.4815 2.62e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
56 3ta2-a2-m4-cB 109 108 0.5474 0.4771 0.4815 2.62e-24 3ta2-a2-m4-cB_3ta2-a2-m5-cB
57 1ufl-a2-m2-cC 99 98 0.5158 0.4949 0.5000 6.48e-24 1ufl-a2-m2-cC_1ufl-a2-m1-cA
58 1v3r-a1-m1-cA 92 93 0.5053 0.5217 0.5161 6.88e-24 1v3r-a1-m1-cC_1v3r-a1-m1-cA
59 3l7p-a1-m1-cC 91 91 0.5053 0.5275 0.5275 1.38e-23 3l7p-a1-m1-cF_3l7p-a1-m1-cC
60 1hwu-a3-m2-cF 91 91 0.5368 0.5604 0.5604 2.96e-23 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
61 1v3r-a1-m1-cC 90 93 0.5053 0.5333 0.5161 3.43e-23 1v3r-a1-m1-cC_1v3r-a1-m1-cA
62 1hwu-a3-m2-cE 84 90 0.5263 0.5952 0.5556 1.33e-22 1hwu-a3-m2-cE_1hwu-a3-m2-cF
63 1ufl-a2-m1-cA 108 108 0.5158 0.4537 0.4537 2.49e-22 1ufl-a2-m2-cC_1ufl-a2-m1-cA
64 4usj-a1-m3-cD 142 109 0.5053 0.3380 0.4404 2.62e-18 4usj-a1-m2-cD_4usj-a1-m3-cD
65 4usj-a1-m2-cD 142 109 0.5053 0.3380 0.4404 2.62e-18 4usj-a1-m2-cD_4usj-a1-m3-cD
66 7o4x-a1-m3-cA 103 95 0.4000 0.3689 0.4000 2.96e-16 7o4x-a1-m2-cA_7o4x-a1-m3-cA
67 7o4x-a1-m2-cA 103 95 0.4000 0.3689 0.4000 2.96e-16 7o4x-a1-m2-cA_7o4x-a1-m3-cA
68 4ozn-a1-m1-cC 113 99 0.4632 0.3894 0.4444 3.78e-15 4ozn-a1-m1-cC_4ozn-a1-m1-cA
69 4ozn-a1-m1-cA 116 103 0.4632 0.3793 0.4272 1.32e-14 4ozn-a1-m1-cC_4ozn-a1-m1-cA
70 4r25-a1-m3-cA 114 110 0.4000 0.3333 0.3455 1.62e-13 4r25-a1-m2-cA_4r25-a1-m3-cA
71 4r25-a1-m2-cA 114 110 0.4000 0.3333 0.3455 1.62e-13 4r25-a1-m2-cA_4r25-a1-m3-cA
72 4yd9-a1-m1-cb 1656 38 0.1368 0.0079 0.3421 2.1 4yd9-a1-m1-cA_4yd9-a1-m1-cb
73 4yd9-a1-m1-cA 1656 38 0.1368 0.0079 0.3421 2.1 4yd9-a1-m1-cA_4yd9-a1-m1-cb

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600