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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MKLIVAIVRPEKLNEVLKALFQAEVRGLTLSRVQGHLHEKVRLEIGVSEPFVKPTVEAIL
KAARTGEVGDGKIFVLPVEKVYRIRTGEED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1v3r-a1-m1-cC 90 90 1.0000 1.0000 1.0000 2.41e-59 1v3r-a1-m1-cC_1v3r-a1-m1-cA
2 1v3r-a1-m1-cA 92 91 1.0000 0.9783 0.9890 1.65e-57 1v3r-a1-m1-cC_1v3r-a1-m1-cA
3 1ufl-a2-m2-cC 99 98 1.0000 0.9091 0.9184 1.92e-56 1ufl-a2-m2-cC_1ufl-a2-m1-cA
4 1ufl-a2-m1-cA 108 108 1.0000 0.8333 0.8333 7.14e-55 1ufl-a2-m2-cC_1ufl-a2-m1-cA
5 1ul3-a3-m4-cB 94 90 0.5222 0.5000 0.5222 2.30e-25 1ul3-a3-m4-cB_1ul3-a3-m5-cA
6 1ul3-a3-m1-cC 94 90 0.5222 0.5000 0.5222 2.30e-25 1ul3-a3-m1-cC_1ul3-a3-m5-cA
7 3t9z-a2-m1-cD 93 91 0.5111 0.4946 0.5055 4.16e-24 3t9z-a2-m1-cD_3t9z-a2-m1-cF
8 3t9z-a2-m1-cF 94 91 0.5111 0.4894 0.5055 4.32e-24 3t9z-a2-m1-cD_3t9z-a2-m1-cF
9 3bzq-a1-m3-cA 99 91 0.4778 0.4343 0.4725 1.34e-23 3bzq-a1-m2-cA_3bzq-a1-m3-cA
10 3bzq-a1-m2-cA 99 91 0.4778 0.4343 0.4725 1.34e-23 3bzq-a1-m2-cA_3bzq-a1-m3-cA
11 1ul3-a3-m5-cA 95 91 0.5222 0.4947 0.5165 1.61e-23 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
12 1ul3-a2-m3-cD 95 93 0.5333 0.5053 0.5161 3.25e-23 1ul3-a2-m2-cD_1ul3-a2-m3-cD
13 1ul3-a2-m2-cD 95 93 0.5333 0.5053 0.5161 3.25e-23 1ul3-a2-m2-cD_1ul3-a2-m3-cD
14 4c3l-a1-m3-cA 89 89 0.5222 0.5281 0.5281 6.13e-23 4c3l-a1-m2-cA_4c3l-a1-m3-cA
15 4c3l-a1-m2-cA 89 89 0.5222 0.5281 0.5281 6.13e-23 4c3l-a1-m2-cA_4c3l-a1-m3-cA
16 3lf0-a1-m1-cC 101 94 0.4778 0.4257 0.4574 8.59e-23 3lf0-a1-m1-cC_3lf0-a1-m1-cB
17 4cnz-a1-m1-cB 100 96 0.5111 0.4600 0.4792 1.07e-22 4cnz-a1-m1-cA_4cnz-a1-m1-cB
18 4cnz-a1-m1-cA 100 96 0.5111 0.4600 0.4792 1.07e-22 4cnz-a1-m1-cA_4cnz-a1-m1-cB
19 5l9n-a1-m3-cA 92 91 0.4778 0.4674 0.4725 6.06e-22 5l9n-a1-m2-cA_5l9n-a1-m3-cA
20 5l9n-a1-m2-cA 92 91 0.4778 0.4674 0.4725 6.06e-22 5l9n-a1-m2-cA_5l9n-a1-m3-cA
21 2xul-a1-m1-cA 106 101 0.5222 0.4434 0.4653 1.21e-21 2xul-a1-m1-cA_2xul-a1-m1-cC
22 2xul-a1-m1-cC 107 102 0.5222 0.4393 0.4608 1.69e-21 2xul-a1-m1-cA_2xul-a1-m1-cC
23 2eg2-a2-m9-cA 95 89 0.5000 0.4737 0.5056 2.11e-21 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
24 2eg2-a2-m6-cA 95 89 0.5000 0.4737 0.5056 2.11e-21 2eg2-a2-m6-cA_2eg2-a2-m9-cA
25 2eg2-a2-m5-cA 95 89 0.5000 0.4737 0.5056 2.11e-21 2eg2-a2-m5-cA_2eg2-a2-m9-cA
26 3lf0-a1-m1-cB 112 105 0.4778 0.3839 0.4095 3.36e-21 3lf0-a1-m1-cC_3lf0-a1-m1-cB
27 3ta2-a2-m5-cB 109 108 0.5111 0.4220 0.4259 3.46e-21 3ta2-a2-m4-cB_3ta2-a2-m5-cB
28 3ta2-a2-m4-cB 109 108 0.5111 0.4220 0.4259 3.46e-21 3ta2-a2-m4-cB_3ta2-a2-m5-cB
29 2o66-a2-m2-cC 106 85 0.4667 0.3962 0.4941 5.00e-21 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
30 2o66-a2-m2-cA 107 87 0.4667 0.3925 0.4828 6.60e-21 2o66-a2-m2-cC_2o66-a2-m2-cA
31 2o66-a2-m1-cA 107 87 0.4667 0.3925 0.4828 6.60e-21 2o66-a2-m2-cC_2o66-a2-m1-cA
32 4co2-a2-m3-cA 112 108 0.5111 0.4107 0.4259 9.05e-21 4co2-a2-m2-cA_4co2-a2-m3-cA
33 4co2-a2-m2-cA 112 108 0.5111 0.4107 0.4259 9.05e-21 4co2-a2-m2-cA_4co2-a2-m3-cA
34 3n5b-a1-m3-cA 112 108 0.5222 0.4196 0.4352 2.91e-20 3n5b-a1-m2-cA_3n5b-a1-m3-cA
35 3n5b-a1-m2-cA 112 108 0.5222 0.4196 0.4352 2.91e-20 3n5b-a1-m2-cA_3n5b-a1-m3-cA
36 2gw8-a1-m3-cA 99 92 0.4556 0.4141 0.4457 1.05e-19 2gw8-a1-m2-cA_2gw8-a1-m3-cA
37 2gw8-a1-m2-cA 99 92 0.4556 0.4141 0.4457 1.05e-19 2gw8-a1-m2-cA_2gw8-a1-m3-cA
38 1hwu-a3-m2-cF 91 88 0.5111 0.5055 0.5227 2.65e-19 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
39 2pii-a1-m3-cA 112 108 0.4778 0.3839 0.3981 4.15e-19 2pii-a1-m2-cA_2pii-a1-m3-cA
40 2pii-a1-m2-cA 112 108 0.4778 0.3839 0.3981 4.15e-19 2pii-a1-m2-cA_2pii-a1-m3-cA
41 2gnk-a2-m3-cA 95 91 0.4111 0.3895 0.4066 5.02e-19 2gnk-a2-m2-cA_2gnk-a2-m3-cA
42 2gnk-a2-m2-cA 95 91 0.4111 0.3895 0.4066 5.02e-19 2gnk-a2-m2-cA_2gnk-a2-m3-cA
43 1hwu-a3-m2-cD 99 93 0.5111 0.4646 0.4946 7.99e-19 1hwu-a3-m1-cA_1hwu-a3-m2-cD
44 1hwu-a3-m1-cA 99 93 0.5111 0.4646 0.4946 8.53e-19 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
45 1hwu-a3-m2-cE 84 87 0.5000 0.5357 0.5172 1.24e-18 1hwu-a3-m2-cE_1hwu-a3-m2-cF
46 7p4v-a1-m3-cA 113 106 0.4667 0.3717 0.3962 2.13e-18 7p4v-a1-m2-cA_7p4v-a1-m3-cA
47 7p4v-a1-m2-cA 113 106 0.4667 0.3717 0.3962 2.13e-18 7p4v-a1-m2-cA_7p4v-a1-m3-cA
48 2rd5-a1-m3-cD 126 102 0.4667 0.3333 0.4118 4.30e-18 2rd5-a1-m2-cD_2rd5-a1-m3-cD
49 2rd5-a1-m2-cD 126 102 0.4667 0.3333 0.4118 4.30e-18 2rd5-a1-m2-cD_2rd5-a1-m3-cD
50 3ncp-a6-m5-cD 99 93 0.5000 0.4545 0.4839 1.55e-17 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
51 3ncp-a6-m4-cD 99 93 0.5000 0.4545 0.4839 1.55e-17 3ncp-a6-m4-cD_3ncp-a6-m5-cD
52 3ncp-a6-m4-cC 100 93 0.5000 0.4500 0.4839 1.75e-17 3ncp-a6-m5-cD_3ncp-a6-m4-cC
53 7p52-a1-m3-cA 111 106 0.5111 0.4144 0.4340 7.17e-17 7p52-a1-m2-cA_7p52-a1-m3-cA
54 7p52-a1-m2-cA 111 106 0.5111 0.4144 0.4340 7.17e-17 7p52-a1-m2-cA_7p52-a1-m3-cA
55 3l7p-a1-m1-cB 88 88 0.4444 0.4545 0.4545 1.06e-16 3l7p-a1-m1-cB_3l7p-a1-m1-cF
56 2nuu-a4-m2-cK 112 108 0.4111 0.3304 0.3426 1.59e-16 2nuu-a4-m1-cH_2nuu-a4-m2-cK
57 2nuu-a4-m1-cH 112 108 0.4111 0.3304 0.3426 1.59e-16 2nuu-a4-m1-cH_2nuu-a4-m2-cK
58 2ns1-a1-m3-cB 113 108 0.4111 0.3274 0.3426 1.78e-16 2ns1-a1-m2-cB_2ns1-a1-m3-cB
59 2ns1-a1-m2-cB 113 108 0.4111 0.3274 0.3426 1.78e-16 2ns1-a1-m2-cB_2ns1-a1-m3-cB
60 3l7p-a1-m1-cF 88 87 0.4333 0.4432 0.4483 7.62e-16 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
61 4ozn-a1-m1-cC 113 99 0.4556 0.3628 0.4141 3.23e-15 4ozn-a1-m1-cC_4ozn-a1-m1-cA
62 7p50-a1-m1-cC 115 106 0.4333 0.3391 0.3679 8.78e-15 7p50-a1-m1-cB_7p50-a1-m1-cC
63 7p50-a1-m1-cB 115 106 0.4333 0.3391 0.3679 8.78e-15 7p50-a1-m1-cB_7p50-a1-m1-cC
64 4ozn-a1-m1-cA 116 103 0.4556 0.3534 0.3981 1.45e-14 4ozn-a1-m1-cC_4ozn-a1-m1-cA
65 3l7p-a1-m1-cC 91 91 0.4333 0.4286 0.4286 8.22e-14 3l7p-a1-m1-cF_3l7p-a1-m1-cC
66 4usj-a1-m3-cD 142 104 0.4556 0.2887 0.3942 3.43e-12 4usj-a1-m2-cD_4usj-a1-m3-cD
67 4usj-a1-m2-cD 142 104 0.4556 0.2887 0.3942 3.43e-12 4usj-a1-m2-cD_4usj-a1-m3-cD
68 7o4x-a1-m3-cA 103 94 0.4000 0.3495 0.3830 1.66e-10 7o4x-a1-m2-cA_7o4x-a1-m3-cA
69 7o4x-a1-m2-cA 103 94 0.4000 0.3495 0.3830 1.66e-10 7o4x-a1-m2-cA_7o4x-a1-m3-cA
70 4r25-a1-m3-cA 114 101 0.3444 0.2719 0.3069 7.46e-08 4r25-a1-m2-cA_4r25-a1-m3-cA
71 4r25-a1-m2-cA 114 101 0.3444 0.2719 0.3069 7.46e-08 4r25-a1-m2-cA_4r25-a1-m3-cA
72 3m05-a3-m3-cC 96 94 0.3222 0.3021 0.3085 1.07e-04 3m05-a3-m3-cC_3m05-a3-m1-cB
73 3m05-a1-m1-cC 96 94 0.3222 0.3021 0.3085 1.07e-04 3m05-a1-m1-cC_3m05-a1-m1-cB
74 3m05-a3-m1-cB 97 94 0.3222 0.2990 0.3085 1.16e-04 3m05-a3-m3-cC_3m05-a3-m1-cB
75 3m05-a1-m1-cB 97 94 0.3222 0.2990 0.3085 1.16e-04 3m05-a1-m1-cC_3m05-a1-m1-cB
76 4wk1-a1-m3-cA 92 85 0.2556 0.2500 0.2706 4.91e-04 4wk1-a1-m2-cA_4wk1-a1-m3-cA
77 4wk1-a1-m2-cA 92 85 0.2556 0.2500 0.2706 4.91e-04 4wk1-a1-m2-cA_4wk1-a1-m3-cA
78 4d3h-a1-m1-cC 101 92 0.2556 0.2277 0.2500 0.019 4d3h-a1-m1-cC_4d3h-a1-m1-cA, 4d3h-a1-m1-cC_4d3h-a1-m1-cB
79 4rww-a1-m1-cB 106 103 0.3000 0.2547 0.2621 0.019 4rww-a1-m1-cC_4rww-a1-m1-cB
80 4d3h-a1-m1-cA 103 94 0.2556 0.2233 0.2447 0.042 4d3h-a1-m1-cC_4d3h-a1-m1-cA
81 4rwx-a1-m1-cB 84 85 0.2556 0.2738 0.2706 0.093 4rwx-a1-m1-cC_4rwx-a1-m1-cB
82 4d3h-a1-m1-cB 104 96 0.2556 0.2212 0.2396 0.10 4d3h-a1-m1-cC_4d3h-a1-m1-cB
83 4rle-a1-m3-cA 116 109 0.3000 0.2328 0.2477 0.31 4rle-a1-m2-cA_4rle-a1-m3-cA
84 4rle-a1-m2-cA 116 109 0.3000 0.2328 0.2477 0.31 4rle-a1-m2-cA_4rle-a1-m3-cA
85 1sb3-a1-m1-cF 157 33 0.1333 0.0764 0.3636 0.94 1sb3-a1-m1-cF_1sb3-a1-m1-cC
86 4rww-a1-m1-cC 103 100 0.2778 0.2427 0.2500 0.96 4rww-a1-m1-cC_4rww-a1-m1-cB
87 1sb3-a1-m1-cC 161 33 0.1333 0.0745 0.3636 0.96 1sb3-a1-m1-cF_1sb3-a1-m1-cC
88 3p4t-a1-m2-cB 381 86 0.2889 0.0682 0.3023 2.3 3p4t-a1-m1-cA_3p4t-a1-m2-cB, 3p4t-a1-m2-cA_3p4t-a1-m2-cB
89 3p4t-a1-m2-cA 381 86 0.2889 0.0682 0.3023 2.3 3p4t-a1-m2-cA_3p4t-a1-m2-cB
90 3p4t-a1-m1-cA 381 86 0.2889 0.0682 0.3023 2.3 3p4t-a1-m1-cA_3p4t-a1-m2-cB
91 7kua-a1-m2-cA 149 24 0.1222 0.0738 0.4583 3.9 7kua-a1-m1-cA_7kua-a1-m2-cA
92 7kua-a1-m1-cA 149 24 0.1222 0.0738 0.4583 3.9 7kua-a1-m1-cA_7kua-a1-m2-cA
93 2qpx-a1-m3-cA 367 59 0.2111 0.0518 0.3220 5.1 2qpx-a1-m2-cA_2qpx-a1-m3-cA
94 2qpx-a1-m2-cA 367 59 0.2111 0.0518 0.3220 5.1 2qpx-a1-m2-cA_2qpx-a1-m3-cA
95 6nob-a2-m2-cA 634 45 0.1556 0.0221 0.3111 6.6 6nob-a2-m1-cA_6nob-a2-m2-cA
96 6nob-a2-m1-cA 634 45 0.1556 0.0221 0.3111 6.6 6nob-a2-m1-cA_6nob-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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