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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKHNLSGFWSRRI
TEEHRLVYAVTDDSLLIAACRYHY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4v8x-a2-m1-cCZ 84 84 1.0000 1.0000 1.0000 2.22e-59 4v8x-a2-m1-cCY_4v8x-a2-m1-cCZ
2 4v8x-a2-m1-cCY 84 84 1.0000 1.0000 1.0000 2.22e-59 4v8x-a2-m1-cCY_4v8x-a2-m1-cCZ
3 6n90-a1-m1-cB 86 86 0.5952 0.5814 0.5814 3.24e-35 6n90-a1-m1-cB_6n90-a1-m1-cA
4 6n90-a1-m1-cA 88 88 0.5952 0.5682 0.5682 6.13e-35 6n90-a1-m1-cB_6n90-a1-m1-cA
5 7cua-a1-m1-cC 87 85 0.5357 0.5172 0.5294 3.26e-30 7cua-a1-m1-cA_7cua-a1-m1-cC
6 7cua-a1-m1-cB 87 85 0.5357 0.5172 0.5294 3.26e-30 7cua-a1-m1-cA_7cua-a1-m1-cB
7 7cua-a1-m1-cA 87 85 0.5357 0.5172 0.5294 3.26e-30 7cua-a1-m1-cA_7cua-a1-m1-cB, 7cua-a1-m1-cA_7cua-a1-m1-cC
8 7ns5-a1-m1-cC 293 29 0.1071 0.0307 0.3103 1.7 7ns5-a1-m1-cD_7ns5-a1-m1-cC
9 7ns5-a1-m1-cB 312 29 0.1071 0.0288 0.3103 1.7 7ns5-a1-m1-cD_7ns5-a1-m1-cB
10 7ns5-a1-m1-cA 319 29 0.1071 0.0282 0.3103 1.7 7ns5-a1-m1-cD_7ns5-a1-m1-cA
11 3gme-a1-m3-cA 482 57 0.1548 0.0270 0.2281 3.2 3gme-a1-m2-cA_3gme-a1-m3-cA
12 3gme-a1-m2-cA 482 57 0.1548 0.0270 0.2281 3.2 3gme-a1-m2-cA_3gme-a1-m3-cA
13 5vae-a5-m1-cG 504 67 0.2857 0.0476 0.3582 3.5 5vae-a5-m1-cE_5vae-a5-m1-cG
14 6acx-a1-m1-cB 1168 33 0.1071 0.0077 0.2727 5.2 6acx-a1-m1-cB_6acx-a1-m1-cA
15 6acx-a1-m1-cA 1175 33 0.1071 0.0077 0.2727 5.2 6acx-a1-m1-cB_6acx-a1-m1-cA
16 4nxf-a1-m1-cA 105 25 0.1310 0.1048 0.4400 6.3 4nxf-a1-m1-cB_4nxf-a1-m1-cA
17 4nxf-a1-m1-cB 103 25 0.1310 0.1068 0.4400 6.8 4nxf-a1-m1-cB_4nxf-a1-m1-cA
18 5vae-a5-m1-cE 504 67 0.2500 0.0417 0.3134 10.0 5vae-a5-m1-cE_5vae-a5-m1-cG

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Reference:
Jacob Schwartz et al.

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