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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MKLSELQSHIKEFDYAPEQSEHYFFKLIEEVGELSESIRKGKSGQPTLDELKGSVAEELY
DVLYYVCALANIHGVNLEKTRELKEVLNKVKYNR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2q5z-a1-m2-cB 94 94 1.0000 1.0000 1.0000 1.00e-64 2q5z-a1-m2-cA_2q5z-a1-m2-cB
2 2q5z-a1-m2-cA 93 92 0.9787 0.9892 1.0000 7.27e-63 2q5z-a1-m2-cA_2q5z-a1-m2-cB
3 2q9l-a1-m1-cB 90 90 0.9468 0.9889 0.9889 2.31e-60 2q9l-a1-m1-cD_2q9l-a1-m1-cB
4 2q9l-a1-m1-cD 78 78 0.8191 0.9872 0.9872 1.45e-51 2q9l-a1-m1-cD_2q9l-a1-m1-cB
5 1vmg-a2-m4-cA 80 81 0.2872 0.3375 0.3333 3.83e-06 1vmg-a2-m1-cA_1vmg-a2-m4-cA, 1vmg-a2-m2-cA_1vmg-a2-m4-cA, 1vmg-a2-m3-cA_1vmg-a2-m4-cA
6 1vmg-a2-m3-cA 80 81 0.2872 0.3375 0.3333 3.83e-06 1vmg-a2-m3-cA_1vmg-a2-m4-cA
7 1vmg-a2-m2-cA 80 81 0.2872 0.3375 0.3333 3.83e-06 1vmg-a2-m2-cA_1vmg-a2-m4-cA
8 1vmg-a2-m1-cA 80 81 0.2872 0.3375 0.3333 3.83e-06 1vmg-a2-m1-cA_1vmg-a2-m4-cA
9 7mu5-a1-m1-cA 110 80 0.2872 0.2455 0.3375 1.76e-04 7mu5-a1-m1-cG_7mu5-a1-m1-cA
10 7mu5-a2-m1-cH 104 76 0.2766 0.2500 0.3421 2.44e-04 7mu5-a2-m1-cH_7mu5-a2-m1-cB, 7mu5-a2-m1-cH_7mu5-a2-m1-cF
11 7mu5-a2-m1-cB 105 76 0.2766 0.2476 0.3421 2.53e-04 7mu5-a2-m1-cH_7mu5-a2-m1-cB
12 7mu5-a2-m1-cF 106 77 0.2872 0.2547 0.3506 0.001 7mu5-a2-m1-cH_7mu5-a2-m1-cF
13 7mu5-a1-m1-cG 104 77 0.2872 0.2596 0.3506 0.001 7mu5-a1-m1-cG_7mu5-a1-m1-cA
14 2oig-a1-m1-cC 90 66 0.2340 0.2444 0.3333 0.006 2oig-a1-m1-cC_2oig-a1-m1-cD
15 5ie9-a1-m1-cD 92 96 0.3085 0.3152 0.3021 0.009 5ie9-a1-m1-cD_5ie9-a1-m1-cA, 5ie9-a1-m1-cD_5ie9-a1-m1-cB, 5ie9-a1-m1-cD_5ie9-a1-m1-cC
16 2oig-a1-m1-cD 104 66 0.2234 0.2019 0.3182 0.010 2oig-a1-m1-cC_2oig-a1-m1-cD
17 7ody-a1-m1-cA 99 92 0.2766 0.2626 0.2826 0.11 7ody-a1-m1-cD_7ody-a1-m1-cA
18 7ody-a1-m1-cB 94 92 0.2766 0.2766 0.2826 0.13 7ody-a1-m1-cD_7ody-a1-m1-cB
19 2gta-a1-m1-cB 90 85 0.2553 0.2667 0.2824 0.16 2gta-a1-m1-cC_2gta-a1-m1-cB
20 4qgp-a2-m1-cA 106 50 0.1915 0.1698 0.3600 0.20 4qgp-a2-m1-cB_4qgp-a2-m1-cA
21 4qgp-a1-m1-cA 106 50 0.1915 0.1698 0.3600 0.20 4qgp-a1-m2-cB_4qgp-a1-m1-cA
22 4qgp-a2-m1-cB 105 50 0.1915 0.1714 0.3600 0.20 4qgp-a2-m1-cB_4qgp-a2-m1-cA
23 4qgp-a1-m2-cB 105 50 0.1915 0.1714 0.3600 0.20 4qgp-a1-m1-cB_4qgp-a1-m2-cB, 4qgp-a1-m2-cB_4qgp-a1-m1-cA
24 4qgp-a1-m1-cB 105 50 0.1915 0.1714 0.3600 0.20 4qgp-a1-m1-cB_4qgp-a1-m2-cB
25 7ody-a1-m1-cC 100 92 0.2766 0.2600 0.2826 0.23 7ody-a1-m1-cD_7ody-a1-m1-cC
26 5ie9-a1-m1-cB 94 96 0.2979 0.2979 0.2917 0.25 5ie9-a1-m1-cD_5ie9-a1-m1-cB
27 5ie9-a1-m1-cA 94 96 0.2979 0.2979 0.2917 0.25 5ie9-a1-m1-cD_5ie9-a1-m1-cA
28 5ie9-a1-m1-cC 95 96 0.2979 0.2947 0.2917 0.26 5ie9-a1-m1-cD_5ie9-a1-m1-cC
29 2gta-a1-m1-cA 92 85 0.2447 0.2500 0.2706 0.28 2gta-a1-m1-cC_2gta-a1-m1-cA
30 7ody-a1-m1-cD 92 92 0.2660 0.2717 0.2717 0.43 7ody-a1-m1-cD_7ody-a1-m1-cA, 7ody-a1-m1-cD_7ody-a1-m1-cB, 7ody-a1-m1-cD_7ody-a1-m1-cC
31 4cg4-a2-m1-cD 376 36 0.1383 0.0346 0.3611 0.47 4cg4-a2-m1-cC_4cg4-a2-m1-cD
32 4cg4-a2-m1-cC 376 36 0.1383 0.0346 0.3611 0.47 4cg4-a2-m1-cC_4cg4-a2-m1-cD
33 7cdw-a1-m1-cB 662 53 0.2234 0.0317 0.3962 1.5 7cdw-a1-m1-cB_7cdw-a1-m1-cA
34 7cdw-a1-m1-cA 667 53 0.2234 0.0315 0.3962 1.6 7cdw-a1-m1-cB_7cdw-a1-m1-cA
35 5mil-a1-m1-cA 157 55 0.2021 0.1210 0.3455 6.0 5mil-a1-m1-cB_5mil-a1-m1-cA
36 5mil-a1-m1-cB 156 55 0.2021 0.1218 0.3455 6.3 5mil-a1-m1-cB_5mil-a1-m1-cA
37 4y9d-a1-m2-cA 235 25 0.1277 0.0511 0.4800 7.5 4y9d-a1-m1-cA_4y9d-a1-m2-cA
38 4y9d-a1-m1-cA 235 25 0.1277 0.0511 0.4800 7.5 4y9d-a1-m1-cA_4y9d-a1-m2-cA
39 2ivo-a1-m2-cB 325 72 0.2340 0.0677 0.3056 8.5 2ivo-a1-m2-cA_2ivo-a1-m2-cB
40 2ivo-a1-m2-cA 325 72 0.2340 0.0677 0.3056 8.5 2ivo-a1-m1-cA_2ivo-a1-m2-cA, 2ivo-a1-m2-cA_2ivo-a1-m2-cB
41 2ivo-a1-m1-cA 325 72 0.2340 0.0677 0.3056 8.5 2ivo-a1-m1-cA_2ivo-a1-m2-cA
42 2gta-a1-m1-cC 81 85 0.2447 0.2840 0.2706 9.0 2gta-a1-m1-cC_2gta-a1-m1-cA, 2gta-a1-m1-cC_2gta-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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