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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
MKLVWTLSSWDDYEFWQRTDARMVEKINDLIRNAKRTPFAGLGKPEPLKGDMAGYWSRRI
TAEHRFVYRVSGSGSEQRLEVIQCRFHY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n90-a1-m1-cA 88 88 1.0000 1.0000 1.0000 1.13e-63 6n90-a1-m1-cB_6n90-a1-m1-cA
2 6n90-a1-m1-cB 86 88 0.9773 1.0000 0.9773 2.75e-60 6n90-a1-m1-cB_6n90-a1-m1-cA
3 4v8x-a2-m1-cCZ 84 88 0.5682 0.5952 0.5682 6.42e-35 4v8x-a2-m1-cCY_4v8x-a2-m1-cCZ
4 4v8x-a2-m1-cCY 84 88 0.5682 0.5952 0.5682 6.42e-35 4v8x-a2-m1-cCY_4v8x-a2-m1-cCZ
5 7cua-a1-m1-cC 87 89 0.3750 0.3793 0.3708 2.14e-22 7cua-a1-m1-cA_7cua-a1-m1-cC
6 7cua-a1-m1-cB 87 89 0.3750 0.3793 0.3708 2.14e-22 7cua-a1-m1-cA_7cua-a1-m1-cB
7 7cua-a1-m1-cA 87 89 0.3750 0.3793 0.3708 2.14e-22 7cua-a1-m1-cA_7cua-a1-m1-cB, 7cua-a1-m1-cA_7cua-a1-m1-cC
8 7l3o-a2-m1-cC 401 56 0.2045 0.0449 0.3214 6.1 7l3o-a2-m1-cB_7l3o-a2-m1-cC
9 7l3o-a2-m1-cB 401 56 0.2045 0.0449 0.3214 6.1 7l3o-a2-m1-cB_7l3o-a2-m1-cC
10 2xcq-a1-m2-cA 652 20 0.1136 0.0153 0.5000 6.9 2xcq-a1-m1-cA_2xcq-a1-m2-cA
11 2xcq-a1-m1-cA 652 20 0.1136 0.0153 0.5000 6.9 2xcq-a1-m1-cA_2xcq-a1-m2-cA
12 5bs3-a1-m1-cD 670 20 0.1136 0.0149 0.5000 7.2 5bs3-a1-m1-cB_5bs3-a1-m1-cD
13 5bs3-a1-m1-cB 670 20 0.1136 0.0149 0.5000 7.2 5bs3-a1-m1-cB_5bs3-a1-m1-cD
14 6fqm-a1-m1-cA 481 20 0.1136 0.0208 0.5000 7.4 6fqm-a1-m1-cC_6fqm-a1-m1-cA
15 6fqm-a1-m1-cC 480 20 0.1136 0.0208 0.5000 7.5 6fqm-a1-m1-cC_6fqm-a1-m1-cA
16 4ddq-a3-m1-cF 452 20 0.1023 0.0199 0.4500 9.8 4ddq-a3-m1-cF_4ddq-a3-m1-cE
17 4ddq-a2-m1-cC 455 20 0.1023 0.0198 0.4500 9.9 4ddq-a2-m1-cC_4ddq-a2-m1-cD
18 4ddq-a3-m1-cE 456 20 0.1023 0.0197 0.4500 9.9 4ddq-a3-m1-cF_4ddq-a3-m1-cE
19 4ddq-a2-m1-cD 455 20 0.1023 0.0198 0.4500 10.0 4ddq-a2-m1-cC_4ddq-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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