Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
MKLYFNGGKKAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTV
QLKVNKAN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2g0c-a2-m2-cA 68 68 1.0000 1.0000 1.0000 1.66e-43 2g0c-a2-m1-cA_2g0c-a2-m2-cA
2 2g0c-a2-m1-cA 68 68 1.0000 1.0000 1.0000 1.66e-43 2g0c-a2-m1-cA_2g0c-a2-m2-cA
3 6sle-a4-m1-cG 279 31 0.1765 0.0430 0.3871 0.83 6sle-a4-m1-cG_6sle-a4-m1-cF
4 6sle-a4-m1-cF 280 31 0.1765 0.0429 0.3871 0.84 6sle-a4-m1-cG_6sle-a4-m1-cF
5 3was-a1-m3-cB 389 38 0.2059 0.0360 0.3684 1.2 3was-a1-m2-cB_3was-a1-m3-cB, 3was-a1-m3-cA_3was-a1-m3-cB
6 3was-a1-m3-cA 389 38 0.2059 0.0360 0.3684 1.2 3was-a1-m3-cA_3was-a1-m3-cB
7 3was-a1-m2-cB 389 38 0.2059 0.0360 0.3684 1.2 3was-a1-m2-cB_3was-a1-m3-cB
8 2qw5-a3-m2-cB 322 36 0.1912 0.0404 0.3611 2.8 2qw5-a3-m1-cB_2qw5-a3-m2-cB
9 2qw5-a3-m1-cB 322 36 0.1912 0.0404 0.3611 2.8 2qw5-a3-m1-cB_2qw5-a3-m2-cB
10 2qw5-a1-m2-cB 322 36 0.1912 0.0404 0.3611 2.8 2qw5-a1-m2-cB_2qw5-a1-m1-cA
11 2qw5-a1-m1-cA 324 36 0.1912 0.0401 0.3611 2.8 2qw5-a1-m2-cB_2qw5-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600