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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
MKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG
QPHHELDSKTIDPKVAFPRRAQPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6dbp-a1-m1-cA 84 84 1.0000 1.0000 1.0000 3.53e-59 6dbp-a1-m1-cB_6dbp-a1-m1-cA
2 6dbp-a1-m1-cB 82 82 0.9762 1.0000 1.0000 1.07e-57 6dbp-a1-m1-cB_6dbp-a1-m1-cA
3 7wm3-a2-m1-cD 179 83 0.4762 0.2235 0.4819 6.77e-26 7wm3-a2-m1-cB_7wm3-a2-m1-cD
4 7wm3-a2-m1-cD 179 79 0.3452 0.1620 0.3671 4.47e-15 7wm3-a2-m1-cB_7wm3-a2-m1-cD
5 7wm3-a2-m1-cB 179 83 0.4762 0.2235 0.4819 6.77e-26 7wm3-a2-m1-cB_7wm3-a2-m1-cD
6 7wm3-a2-m1-cB 179 79 0.3452 0.1620 0.3671 4.47e-15 7wm3-a2-m1-cB_7wm3-a2-m1-cD
7 6dcl-a1-m1-cB 171 78 0.4643 0.2281 0.5000 1.82e-24 6dcl-a1-m1-cB_6dcl-a1-m1-cA
8 6dcl-a1-m1-cB 171 78 0.3452 0.1696 0.3718 4.33e-13 6dcl-a1-m1-cB_6dcl-a1-m1-cA
9 6dcl-a1-m1-cA 182 78 0.4643 0.2143 0.5000 2.45e-24 6dcl-a1-m1-cB_6dcl-a1-m1-cA
10 6dcl-a1-m1-cA 182 79 0.3452 0.1593 0.3671 5.24e-15 6dcl-a1-m1-cB_6dcl-a1-m1-cA
11 3nnc-a2-m4-cA 175 63 0.2857 0.1371 0.3810 4.83e-08 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
12 3nnc-a2-m4-cA 175 85 0.3214 0.1543 0.3176 2.31e-04 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
13 3nnc-a2-m3-cA 175 63 0.2857 0.1371 0.3810 4.83e-08 3nnc-a2-m3-cA_3nnc-a2-m4-cA
14 3nnc-a2-m3-cA 175 85 0.3214 0.1543 0.3176 2.31e-04 3nnc-a2-m3-cA_3nnc-a2-m4-cA
15 3nnc-a2-m2-cA 175 63 0.2857 0.1371 0.3810 4.83e-08 3nnc-a2-m2-cA_3nnc-a2-m4-cA
16 3nnc-a2-m2-cA 175 85 0.3214 0.1543 0.3176 2.31e-04 3nnc-a2-m2-cA_3nnc-a2-m4-cA
17 5kw6-a1-m1-cB 198 48 0.1667 0.0707 0.2917 4.50e-06 5kw6-a1-m1-cB_5kw6-a1-m1-cA
18 5kw6-a1-m1-cB 198 60 0.1905 0.0808 0.2667 8.81e-05 5kw6-a1-m1-cB_5kw6-a1-m1-cA
19 5kw6-a1-m1-cA 201 48 0.1667 0.0697 0.2917 4.61e-06 5kw6-a1-m1-cB_5kw6-a1-m1-cA
20 5kw6-a1-m1-cA 201 60 0.1905 0.0796 0.2667 8.73e-05 5kw6-a1-m1-cB_5kw6-a1-m1-cA
21 3val-a1-m1-cI 172 58 0.1905 0.0930 0.2759 2.31e-05 3val-a1-m1-cI_3val-a1-m1-cA
22 2g4b-a1-m2-cA 172 58 0.1905 0.0930 0.2759 2.31e-05 2g4b-a1-m1-cA_2g4b-a1-m2-cA
23 2g4b-a1-m1-cA 172 58 0.1905 0.0930 0.2759 2.31e-05 2g4b-a1-m1-cA_2g4b-a1-m2-cA
24 3val-a1-m1-cA 174 58 0.1905 0.0920 0.2759 2.34e-05 3val-a1-m1-cI_3val-a1-m1-cA
25 3vai-a1-m1-cB 174 58 0.1905 0.0920 0.2759 2.34e-05 3vai-a1-m1-cA_3vai-a1-m1-cB
26 3vai-a1-m1-cA 174 58 0.1905 0.0920 0.2759 2.34e-05 3vai-a1-m1-cA_3vai-a1-m1-cB
27 6r5k-a1-m1-cF 165 62 0.2381 0.1212 0.3226 3.23e-05 6r5k-a1-m1-cF_6r5k-a1-m1-cH
28 6r5k-a1-m1-cF 165 58 0.2262 0.1152 0.3276 0.006 6r5k-a1-m1-cF_6r5k-a1-m1-cH
29 3md1-a4-m5-cB 79 64 0.2738 0.2911 0.3594 8.46e-05 3md1-a4-m4-cB_3md1-a4-m5-cB
30 3md1-a4-m4-cB 79 64 0.2738 0.2911 0.3594 8.46e-05 3md1-a4-m4-cB_3md1-a4-m5-cB
31 6r5k-a1-m1-cD 390 66 0.2262 0.0487 0.2879 1.17e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH
32 6r5k-a1-m1-cD 390 59 0.2381 0.0513 0.3390 2.01e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH
33 6r5k-a1-m1-cD 390 57 0.2262 0.0487 0.3333 0.015 6r5k-a1-m1-cD_6r5k-a1-m1-cH
34 6r5k-a1-m1-cD 390 47 0.1548 0.0333 0.2766 0.11 6r5k-a1-m1-cD_6r5k-a1-m1-cH
35 6r5k-a1-m1-cH 394 66 0.2262 0.0482 0.2879 1.22e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
36 6r5k-a1-m1-cH 394 59 0.2381 0.0508 0.3390 2.15e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
37 6r5k-a1-m1-cH 394 57 0.2262 0.0482 0.3333 0.016 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
38 6r5k-a1-m1-cH 394 47 0.1548 0.0330 0.2766 0.12 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
39 3md3-a2-m2-cA 165 48 0.2143 0.1091 0.3750 1.26e-04 3md3-a2-m1-cA_3md3-a2-m2-cA
40 3md3-a2-m2-cA 165 74 0.1905 0.0970 0.2162 2.8 3md3-a2-m1-cA_3md3-a2-m2-cA
41 3md3-a2-m1-cA 165 48 0.2143 0.1091 0.3750 1.26e-04 3md3-a2-m1-cA_3md3-a2-m2-cA
42 3md3-a2-m1-cA 165 74 0.1905 0.0970 0.2162 2.8 3md3-a2-m1-cA_3md3-a2-m2-cA
43 2jwn-a1-m1-cB 124 80 0.2024 0.1371 0.2125 2.38e-04 2jwn-a1-m1-cA_2jwn-a1-m1-cB
44 2jwn-a1-m1-cA 124 80 0.2024 0.1371 0.2125 2.38e-04 2jwn-a1-m1-cA_2jwn-a1-m1-cB
45 5t9p-a6-m1-cD 91 35 0.1548 0.1429 0.3714 4.14e-04 5t9p-a6-m1-cD_5t9p-a6-m1-cC
46 5t9p-a6-m1-cC 106 36 0.1548 0.1226 0.3611 4.97e-04 5t9p-a6-m1-cD_5t9p-a6-m1-cC
47 3d2w-a2-m2-cA 72 60 0.2024 0.2361 0.2833 0.001 3d2w-a2-m1-cA_3d2w-a2-m2-cA
48 3d2w-a2-m1-cA 72 60 0.2024 0.2361 0.2833 0.001 3d2w-a2-m1-cA_3d2w-a2-m2-cA
49 6gc5-a1-m1-cA 79 49 0.2024 0.2152 0.3469 0.002 6gc5-a1-m1-cB_6gc5-a1-m1-cA
50 6gd1-a1-m1-cB 187 49 0.2024 0.0909 0.3469 0.002 6gd1-a1-m1-cB_6gd1-a1-m1-cA
51 6gd1-a1-m1-cA 190 49 0.2024 0.0895 0.3469 0.002 6gd1-a1-m1-cB_6gd1-a1-m1-cA
52 3bs9-a3-m1-cB 79 59 0.2143 0.2278 0.3051 0.003 3bs9-a3-m1-cA_3bs9-a3-m1-cB
53 3bs9-a3-m1-cA 79 59 0.2143 0.2278 0.3051 0.003 3bs9-a3-m1-cA_3bs9-a3-m1-cB
54 3b4d-a1-m2-cA 80 53 0.1310 0.1375 0.2075 0.003 3b4d-a1-m1-cA_3b4d-a1-m2-cA
55 3b4d-a1-m1-cA 80 53 0.1310 0.1375 0.2075 0.003 3b4d-a1-m1-cA_3b4d-a1-m2-cA
56 6es4-a1-m1-cB 204 79 0.2857 0.1176 0.3038 0.005 6es4-a1-m1-cB_6es4-a1-m1-cA
57 6es4-a1-m1-cA 206 79 0.2857 0.1165 0.3038 0.005 6es4-a1-m1-cB_6es4-a1-m1-cA
58 6ff7-a1-m1-cz 101 49 0.1786 0.1485 0.3061 0.006 6ff7-a1-m1-cN_6ff7-a1-m1-cz
59 6ff7-a1-m1-cN 101 49 0.1786 0.1485 0.3061 0.006 6ff7-a1-m1-cN_6ff7-a1-m1-cz
60 5ifm-a1-m1-cA 254 60 0.2024 0.0669 0.2833 0.016 5ifm-a1-m1-cA_5ifm-a1-m1-cB
61 5ifm-a1-m1-cB 259 60 0.2024 0.0656 0.2833 0.016 5ifm-a1-m1-cA_5ifm-a1-m1-cB
62 5ifn-a1-m1-cB 252 46 0.1667 0.0556 0.3043 0.020 5ifn-a1-m1-cB_5ifn-a1-m1-cA
63 5ifn-a1-m1-cB 252 57 0.2262 0.0754 0.3333 0.53 5ifn-a1-m1-cB_5ifn-a1-m1-cA
64 5ifn-a1-m1-cA 257 46 0.1667 0.0545 0.3043 0.020 5ifn-a1-m1-cB_5ifn-a1-m1-cA
65 5ifn-a1-m1-cA 257 57 0.2262 0.0739 0.3333 0.56 5ifn-a1-m1-cB_5ifn-a1-m1-cA
66 7sp0-a1-m1-cA 253 52 0.1667 0.0553 0.2692 0.066 7sp0-a1-m1-cB_7sp0-a1-m1-cA
67 7sp0-a1-m1-cA 253 57 0.2262 0.0751 0.3333 0.52 7sp0-a1-m1-cB_7sp0-a1-m1-cA
68 7sp0-a1-m1-cB 244 52 0.1667 0.0574 0.2692 0.072 7sp0-a1-m1-cB_7sp0-a1-m1-cA
69 7sp0-a1-m1-cB 244 57 0.2262 0.0779 0.3333 0.65 7sp0-a1-m1-cB_7sp0-a1-m1-cA
70 5ca5-a1-m1-cB 248 81 0.2262 0.0766 0.2346 0.29 5ca5-a1-m1-cA_5ca5-a1-m1-cB
71 5ca5-a1-m1-cA 248 81 0.2262 0.0766 0.2346 0.29 5ca5-a1-m1-cA_5ca5-a1-m1-cB
72 4wik-a1-m1-cB 225 56 0.2262 0.0844 0.3393 0.54 4wik-a1-m1-cB_4wik-a1-m1-cA
73 4wik-a1-m1-cA 228 56 0.2262 0.0833 0.3393 0.59 4wik-a1-m1-cB_4wik-a1-m1-cA
74 3q98-a1-m3-cA 366 63 0.1905 0.0437 0.2540 4.4 3q98-a1-m2-cA_3q98-a1-m3-cA
75 3q98-a1-m2-cA 366 63 0.1905 0.0437 0.2540 4.4 3q98-a1-m2-cA_3q98-a1-m3-cA
76 4liu-a1-m2-cA 351 27 0.1310 0.0313 0.4074 6.0 4liu-a1-m1-cA_4liu-a1-m2-cA
77 4liu-a1-m1-cA 351 27 0.1310 0.0313 0.4074 6.0 4liu-a1-m1-cA_4liu-a1-m2-cA
78 3ded-a2-m1-cC 88 22 0.1310 0.1250 0.5000 7.1 3ded-a2-m1-cD_3ded-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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