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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
MKMLKEKAGALAGQIWEALNGTEGLTQKQIKKATKLKADKDFFLGLGWLLREDKVVTSEV
EGEIFVKLVLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2l01-a1-m1-cB 77 77 1.0000 1.0000 1.0000 4.32e-50 2l01-a1-m1-cA_2l01-a1-m1-cB
2 2l01-a1-m1-cA 77 77 1.0000 1.0000 1.0000 4.32e-50 2l01-a1-m1-cA_2l01-a1-m1-cB
3 2l02-a1-m1-cB 82 62 0.2987 0.2805 0.3710 1.19e-06 2l02-a1-m1-cA_2l02-a1-m1-cB
4 2l02-a1-m1-cA 82 62 0.2987 0.2805 0.3710 1.19e-06 2l02-a1-m1-cA_2l02-a1-m1-cB
5 3afk-a1-m1-cB 166 25 0.1429 0.0663 0.4400 0.34 3afk-a1-m1-cB_3afk-a1-m1-cA
6 4z6k-a1-m1-cC 345 25 0.1039 0.0232 0.3200 1.6 4z6k-a1-m1-cD_4z6k-a1-m1-cC
7 4z6k-a1-m1-cA 345 25 0.1039 0.0232 0.3200 1.6 4z6k-a1-m1-cD_4z6k-a1-m1-cA
8 3mtu-a2-m1-cB 65 51 0.2078 0.2462 0.3137 1.9 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
9 6sl3-a1-m2-cA 618 34 0.1688 0.0210 0.3824 2.6 6sl3-a1-m1-cA_6sl3-a1-m2-cA
10 6sl3-a1-m1-cA 618 34 0.1688 0.0210 0.3824 2.6 6sl3-a1-m1-cA_6sl3-a1-m2-cA
11 3mtu-a2-m1-cD 64 50 0.2078 0.2500 0.3200 2.6 3mtu-a2-m1-cD_3mtu-a2-m1-cB
12 3mtu-a2-m1-cA 72 51 0.2078 0.2222 0.3137 2.7 3mtu-a2-m1-cB_3mtu-a2-m1-cA
13 1s7m-a3-m1-cC 157 63 0.2468 0.1210 0.3016 5.1 1s7m-a3-m1-cB_1s7m-a3-m1-cC, 1s7m-a3-m1-cC_1s7m-a3-m2-cF
14 1s7m-a3-m2-cF 157 63 0.2468 0.1210 0.3016 5.3 1s7m-a3-m1-cC_1s7m-a3-m2-cF
15 1s7m-a3-m1-cB 157 63 0.2468 0.1210 0.3016 5.3 1s7m-a3-m1-cB_1s7m-a3-m1-cC
16 7ec1-a1-m1-cB 498 10 0.1039 0.0161 0.8000 6.1 7ec1-a1-m1-cB_7ec1-a1-m1-cA
17 7ec1-a1-m1-cA 502 10 0.1039 0.0159 0.8000 6.5 7ec1-a1-m1-cB_7ec1-a1-m1-cA
18 6sl2-a1-m2-cA 606 32 0.1558 0.0198 0.3750 7.8 6sl2-a1-m1-cA_6sl2-a1-m2-cA
19 6sl2-a1-m1-cA 606 32 0.1558 0.0198 0.3750 7.8 6sl2-a1-m1-cA_6sl2-a1-m2-cA
20 4etk-a3-m1-cB 164 92 0.3636 0.1707 0.3043 8.8 4etk-a3-m1-cB_4etk-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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