Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=93)
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRGLLQKTKVEVVVSDDAVDEVVEAI
VSSARTGKFGDGRIFVIPVEKSVKIRTGDEEVA

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3t9z-a2-m1-cF 94 93 1.0000 0.9894 1.0000 1.34e-59 3t9z-a2-m1-cD_3t9z-a2-m1-cF
2 3t9z-a2-m1-cD 93 93 1.0000 1.0000 1.0000 1.59e-59 3t9z-a2-m1-cD_3t9z-a2-m1-cF
3 3ta2-a2-m5-cB 109 109 0.9892 0.8440 0.8440 3.55e-54 3ta2-a2-m4-cB_3ta2-a2-m5-cB
4 3ta2-a2-m4-cB 109 109 0.9892 0.8440 0.8440 3.55e-54 3ta2-a2-m4-cB_3ta2-a2-m5-cB
5 3ncp-a6-m5-cD 99 93 0.6237 0.5859 0.6237 2.83e-31 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
6 3ncp-a6-m4-cD 99 93 0.6237 0.5859 0.6237 2.83e-31 3ncp-a6-m4-cD_3ncp-a6-m5-cD
7 3ncp-a6-m4-cC 100 93 0.6237 0.5800 0.6237 2.85e-31 3ncp-a6-m5-cD_3ncp-a6-m4-cC
8 7p4v-a1-m3-cA 113 106 0.5591 0.4602 0.4906 1.06e-28 7p4v-a1-m2-cA_7p4v-a1-m3-cA
9 7p4v-a1-m2-cA 113 106 0.5591 0.4602 0.4906 1.06e-28 7p4v-a1-m2-cA_7p4v-a1-m3-cA
10 4c3l-a1-m3-cA 89 89 0.5376 0.5618 0.5618 4.07e-28 4c3l-a1-m2-cA_4c3l-a1-m3-cA
11 4c3l-a1-m2-cA 89 89 0.5376 0.5618 0.5618 4.07e-28 4c3l-a1-m2-cA_4c3l-a1-m3-cA
12 7p52-a1-m3-cA 111 106 0.5914 0.4955 0.5189 5.33e-28 7p52-a1-m2-cA_7p52-a1-m3-cA
13 7p52-a1-m2-cA 111 106 0.5914 0.4955 0.5189 5.33e-28 7p52-a1-m2-cA_7p52-a1-m3-cA
14 5l9n-a1-m3-cA 92 91 0.5269 0.5326 0.5385 2.16e-27 5l9n-a1-m2-cA_5l9n-a1-m3-cA
15 5l9n-a1-m2-cA 92 91 0.5269 0.5326 0.5385 2.16e-27 5l9n-a1-m2-cA_5l9n-a1-m3-cA
16 2eg2-a2-m9-cA 95 89 0.5591 0.5474 0.5843 3.16e-27 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
17 2eg2-a2-m6-cA 95 89 0.5591 0.5474 0.5843 3.16e-27 2eg2-a2-m6-cA_2eg2-a2-m9-cA
18 2eg2-a2-m5-cA 95 89 0.5591 0.5474 0.5843 3.16e-27 2eg2-a2-m5-cA_2eg2-a2-m9-cA
19 1ul3-a3-m5-cA 95 91 0.5484 0.5368 0.5604 3.90e-27 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
20 2gw8-a1-m3-cA 99 92 0.5161 0.4848 0.5217 7.37e-27 2gw8-a1-m2-cA_2gw8-a1-m3-cA
21 2gw8-a1-m2-cA 99 92 0.5161 0.4848 0.5217 7.37e-27 2gw8-a1-m2-cA_2gw8-a1-m3-cA
22 1ul3-a2-m3-cD 95 93 0.5591 0.5474 0.5591 2.10e-26 1ul3-a2-m2-cD_1ul3-a2-m3-cD
23 1ul3-a2-m2-cD 95 93 0.5591 0.5474 0.5591 2.10e-26 1ul3-a2-m2-cD_1ul3-a2-m3-cD
24 2xul-a1-m1-cA 106 101 0.5484 0.4811 0.5050 2.29e-26 2xul-a1-m1-cA_2xul-a1-m1-cC
25 2gnk-a2-m3-cA 95 93 0.4839 0.4737 0.4839 3.12e-26 2gnk-a2-m2-cA_2gnk-a2-m3-cA
26 2gnk-a2-m2-cA 95 93 0.4839 0.4737 0.4839 3.12e-26 2gnk-a2-m2-cA_2gnk-a2-m3-cA
27 2xul-a1-m1-cC 107 102 0.5484 0.4766 0.5000 3.86e-26 2xul-a1-m1-cA_2xul-a1-m1-cC
28 4cnz-a1-m1-cB 100 94 0.5269 0.4900 0.5213 5.42e-26 4cnz-a1-m1-cA_4cnz-a1-m1-cB
29 4cnz-a1-m1-cA 100 94 0.5269 0.4900 0.5213 5.42e-26 4cnz-a1-m1-cA_4cnz-a1-m1-cB
30 1ul3-a3-m4-cB 94 91 0.5484 0.5426 0.5604 8.20e-26 1ul3-a3-m4-cB_1ul3-a3-m5-cA
31 1ul3-a3-m1-cC 94 91 0.5484 0.5426 0.5604 8.20e-26 1ul3-a3-m1-cC_1ul3-a3-m5-cA
32 3n5b-a1-m3-cA 112 108 0.5699 0.4732 0.4907 9.31e-26 3n5b-a1-m2-cA_3n5b-a1-m3-cA
33 3n5b-a1-m2-cA 112 108 0.5699 0.4732 0.4907 9.31e-26 3n5b-a1-m2-cA_3n5b-a1-m3-cA
34 3bzq-a1-m3-cA 99 90 0.4731 0.4444 0.4889 2.07e-25 3bzq-a1-m2-cA_3bzq-a1-m3-cA
35 3bzq-a1-m2-cA 99 90 0.4731 0.4444 0.4889 2.07e-25 3bzq-a1-m2-cA_3bzq-a1-m3-cA
36 1v3r-a1-m1-cA 92 91 0.4946 0.5000 0.5055 2.08e-25 1v3r-a1-m1-cC_1v3r-a1-m1-cA
37 3lf0-a1-m1-cC 101 93 0.4731 0.4356 0.4731 4.55e-25 3lf0-a1-m1-cC_3lf0-a1-m1-cB
38 7p50-a1-m1-cC 115 104 0.5054 0.4087 0.4519 1.50e-24 7p50-a1-m1-cB_7p50-a1-m1-cC
39 7p50-a1-m1-cB 115 104 0.5054 0.4087 0.4519 1.50e-24 7p50-a1-m1-cB_7p50-a1-m1-cC
40 2pii-a1-m3-cA 112 110 0.5484 0.4554 0.4636 3.17e-24 2pii-a1-m2-cA_2pii-a1-m3-cA
41 2pii-a1-m2-cA 112 110 0.5484 0.4554 0.4636 3.17e-24 2pii-a1-m2-cA_2pii-a1-m3-cA
42 1v3r-a1-m1-cC 90 91 0.4946 0.5111 0.5055 4.30e-24 1v3r-a1-m1-cC_1v3r-a1-m1-cA
43 4co2-a2-m3-cA 112 106 0.5269 0.4375 0.4623 4.39e-24 4co2-a2-m2-cA_4co2-a2-m3-cA
44 4co2-a2-m2-cA 112 106 0.5269 0.4375 0.4623 4.39e-24 4co2-a2-m2-cA_4co2-a2-m3-cA
45 1ufl-a2-m2-cC 99 98 0.5054 0.4747 0.4796 7.15e-24 1ufl-a2-m2-cC_1ufl-a2-m1-cA
46 3lf0-a1-m1-cB 112 105 0.4731 0.3929 0.4190 3.10e-23 3lf0-a1-m1-cC_3lf0-a1-m1-cB
47 1ufl-a2-m1-cA 108 108 0.5054 0.4352 0.4352 3.62e-22 1ufl-a2-m2-cC_1ufl-a2-m1-cA
48 2nuu-a4-m2-cK 112 110 0.4839 0.4018 0.4091 6.22e-22 2nuu-a4-m1-cH_2nuu-a4-m2-cK
49 2nuu-a4-m1-cH 112 110 0.4839 0.4018 0.4091 6.22e-22 2nuu-a4-m1-cH_2nuu-a4-m2-cK
50 2ns1-a1-m3-cB 113 110 0.4839 0.3982 0.4091 7.28e-22 2ns1-a1-m2-cB_2ns1-a1-m3-cB
51 2ns1-a1-m2-cB 113 110 0.4839 0.3982 0.4091 7.28e-22 2ns1-a1-m2-cB_2ns1-a1-m3-cB
52 3l7p-a1-m1-cB 88 88 0.4731 0.5000 0.5000 6.67e-21 3l7p-a1-m1-cB_3l7p-a1-m1-cF
53 1hwu-a3-m1-cA 99 93 0.5376 0.5051 0.5376 2.61e-20 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
54 3l7p-a1-m1-cF 88 87 0.4624 0.4886 0.4943 4.62e-20 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
55 4ozn-a1-m1-cC 113 98 0.5054 0.4159 0.4796 7.81e-20 4ozn-a1-m1-cC_4ozn-a1-m1-cA
56 1hwu-a3-m2-cD 99 93 0.5269 0.4949 0.5269 3.28e-19 1hwu-a3-m1-cA_1hwu-a3-m2-cD
57 4ozn-a1-m1-cA 116 102 0.5054 0.4052 0.4608 3.51e-19 4ozn-a1-m1-cC_4ozn-a1-m1-cA
58 1hwu-a3-m2-cF 91 89 0.5161 0.5275 0.5393 5.70e-19 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
59 1hwu-a3-m2-cE 84 88 0.5161 0.5714 0.5455 7.27e-19 1hwu-a3-m2-cE_1hwu-a3-m2-cF
60 3l7p-a1-m1-cC 91 91 0.4731 0.4835 0.4835 8.35e-19 3l7p-a1-m1-cF_3l7p-a1-m1-cC
61 2o66-a2-m2-cA 107 87 0.3978 0.3458 0.4253 1.09e-18 2o66-a2-m2-cC_2o66-a2-m2-cA
62 2o66-a2-m1-cA 107 87 0.3978 0.3458 0.4253 1.09e-18 2o66-a2-m2-cC_2o66-a2-m1-cA
63 2o66-a2-m2-cC 106 85 0.3871 0.3396 0.4235 5.54e-18 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
64 2rd5-a1-m3-cD 126 104 0.4086 0.3016 0.3654 4.13e-16 2rd5-a1-m2-cD_2rd5-a1-m3-cD
65 2rd5-a1-m2-cD 126 104 0.4086 0.3016 0.3654 4.13e-16 2rd5-a1-m2-cD_2rd5-a1-m3-cD
66 7o4x-a1-m3-cA 103 94 0.4086 0.3689 0.4043 2.17e-14 7o4x-a1-m2-cA_7o4x-a1-m3-cA
67 7o4x-a1-m2-cA 103 94 0.4086 0.3689 0.4043 2.17e-14 7o4x-a1-m2-cA_7o4x-a1-m3-cA
68 4usj-a1-m3-cD 142 102 0.4301 0.2817 0.3922 1.07e-13 4usj-a1-m2-cD_4usj-a1-m3-cD
69 4usj-a1-m2-cD 142 102 0.4301 0.2817 0.3922 1.07e-13 4usj-a1-m2-cD_4usj-a1-m3-cD
70 4r25-a1-m3-cA 114 101 0.3656 0.2982 0.3366 3.34e-11 4r25-a1-m2-cA_4r25-a1-m3-cA
71 4r25-a1-m2-cA 114 101 0.3656 0.2982 0.3366 3.34e-11 4r25-a1-m2-cA_4r25-a1-m3-cA
72 2zxf-a1-m2-cA 530 52 0.1935 0.0340 0.3462 0.045 2zxf-a1-m1-cA_2zxf-a1-m2-cA
73 2zxf-a1-m1-cA 530 52 0.1935 0.0340 0.3462 0.045 2zxf-a1-m1-cA_2zxf-a1-m2-cA
74 3ros-a1-m2-cA 449 84 0.2796 0.0579 0.3095 0.27 3ros-a1-m1-cA_3ros-a1-m2-cA
75 3ros-a1-m1-cA 449 84 0.2796 0.0579 0.3095 0.27 3ros-a1-m1-cA_3ros-a1-m2-cA
76 4yd9-a1-m1-cb 1656 51 0.1613 0.0091 0.2941 1.1 4yd9-a1-m1-cA_4yd9-a1-m1-cb
77 4yd9-a1-m1-cA 1656 51 0.1613 0.0091 0.2941 1.1 4yd9-a1-m1-cA_4yd9-a1-m1-cb
78 5hh0-a1-m2-cA 195 37 0.1505 0.0718 0.3784 1.1 5hh0-a1-m1-cA_5hh0-a1-m2-cA
79 5hh0-a1-m1-cA 195 37 0.1505 0.0718 0.3784 1.1 5hh0-a1-m1-cA_5hh0-a1-m2-cA
80 4kr3-a1-m2-cA 466 35 0.1398 0.0279 0.3714 2.0 4kr3-a1-m1-cA_4kr3-a1-m2-cA
81 4kr3-a1-m1-cA 466 35 0.1398 0.0279 0.3714 2.0 4kr3-a1-m1-cA_4kr3-a1-m2-cA
82 4kqe-a1-m2-cA 597 35 0.1398 0.0218 0.3714 3.7 4kqe-a1-m1-cA_4kqe-a1-m2-cA
83 4kqe-a1-m1-cA 597 35 0.1398 0.0218 0.3714 3.7 4kqe-a1-m1-cA_4kqe-a1-m2-cA
84 1y4u-a1-m1-cA 472 63 0.2151 0.0424 0.3175 6.2 1y4u-a1-m1-cB_1y4u-a1-m1-cA
85 4bs9-a1-m2-cA 691 54 0.1720 0.0232 0.2963 7.3 4bs9-a1-m1-cA_4bs9-a1-m2-cA
86 4bs9-a1-m1-cA 691 54 0.1720 0.0232 0.2963 7.3 4bs9-a1-m1-cA_4bs9-a1-m2-cA
87 1siq-a1-m4-cA 390 59 0.1720 0.0410 0.2712 7.7 1siq-a1-m1-cA_1siq-a1-m4-cA, 1siq-a1-m2-cA_1siq-a1-m4-cA, 1siq-a1-m3-cA_1siq-a1-m4-cA
88 1siq-a1-m3-cA 390 59 0.1720 0.0410 0.2712 7.7 1siq-a1-m3-cA_1siq-a1-m4-cA
89 1siq-a1-m2-cA 390 59 0.1720 0.0410 0.2712 7.7 1siq-a1-m2-cA_1siq-a1-m4-cA
90 1siq-a1-m1-cA 390 59 0.1720 0.0410 0.2712 7.7 1siq-a1-m1-cA_1siq-a1-m4-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600