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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRGLLQKTKVEVVVSDDAVDEVVEAI
VSSARTGKFGDGRIFVIPVEKSVKIRTGDEEVAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3t9z-a2-m1-cF 94 94 1.0000 1.0000 1.0000 2.82e-60 3t9z-a2-m1-cD_3t9z-a2-m1-cF
2 3t9z-a2-m1-cD 93 93 0.9894 1.0000 1.0000 1.36e-59 3t9z-a2-m1-cD_3t9z-a2-m1-cF
3 3ta2-a2-m5-cB 109 109 0.9787 0.8440 0.8440 3.24e-54 3ta2-a2-m4-cB_3ta2-a2-m5-cB
4 3ta2-a2-m4-cB 109 109 0.9787 0.8440 0.8440 3.24e-54 3ta2-a2-m4-cB_3ta2-a2-m5-cB
5 3ncp-a6-m5-cD 99 93 0.6170 0.5859 0.6237 2.41e-31 3ncp-a6-m4-cD_3ncp-a6-m5-cD, 3ncp-a6-m5-cD_3ncp-a6-m4-cC
6 3ncp-a6-m4-cD 99 93 0.6170 0.5859 0.6237 2.41e-31 3ncp-a6-m4-cD_3ncp-a6-m5-cD
7 3ncp-a6-m4-cC 100 93 0.6170 0.5800 0.6237 2.80e-31 3ncp-a6-m5-cD_3ncp-a6-m4-cC
8 7p4v-a1-m3-cA 113 106 0.5532 0.4602 0.4906 9.23e-29 7p4v-a1-m2-cA_7p4v-a1-m3-cA
9 7p4v-a1-m2-cA 113 106 0.5532 0.4602 0.4906 9.23e-29 7p4v-a1-m2-cA_7p4v-a1-m3-cA
10 4c3l-a1-m3-cA 89 89 0.5319 0.5618 0.5618 3.51e-28 4c3l-a1-m2-cA_4c3l-a1-m3-cA
11 4c3l-a1-m2-cA 89 89 0.5319 0.5618 0.5618 3.51e-28 4c3l-a1-m2-cA_4c3l-a1-m3-cA
12 7p52-a1-m3-cA 111 106 0.5851 0.4955 0.5189 4.60e-28 7p52-a1-m2-cA_7p52-a1-m3-cA
13 7p52-a1-m2-cA 111 106 0.5851 0.4955 0.5189 4.60e-28 7p52-a1-m2-cA_7p52-a1-m3-cA
14 1ul3-a3-m5-cA 95 94 0.5532 0.5474 0.5532 1.46e-27 1ul3-a3-m1-cC_1ul3-a3-m5-cA, 1ul3-a3-m4-cB_1ul3-a3-m5-cA
15 5l9n-a1-m3-cA 92 91 0.5213 0.5326 0.5385 1.64e-27 5l9n-a1-m2-cA_5l9n-a1-m3-cA
16 5l9n-a1-m2-cA 92 91 0.5213 0.5326 0.5385 1.64e-27 5l9n-a1-m2-cA_5l9n-a1-m3-cA
17 2gw8-a1-m3-cA 99 97 0.5319 0.5051 0.5155 1.83e-27 2gw8-a1-m2-cA_2gw8-a1-m3-cA
18 2gw8-a1-m2-cA 99 97 0.5319 0.5051 0.5155 1.83e-27 2gw8-a1-m2-cA_2gw8-a1-m3-cA
19 2eg2-a2-m9-cA 95 89 0.5532 0.5474 0.5843 2.59e-27 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
20 2eg2-a2-m6-cA 95 89 0.5532 0.5474 0.5843 2.59e-27 2eg2-a2-m6-cA_2eg2-a2-m9-cA
21 2eg2-a2-m5-cA 95 89 0.5532 0.5474 0.5843 2.59e-27 2eg2-a2-m5-cA_2eg2-a2-m9-cA
22 2gnk-a2-m3-cA 95 94 0.4894 0.4842 0.4894 6.63e-27 2gnk-a2-m2-cA_2gnk-a2-m3-cA
23 2gnk-a2-m2-cA 95 94 0.4894 0.4842 0.4894 6.63e-27 2gnk-a2-m2-cA_2gnk-a2-m3-cA
24 2xul-a1-m1-cA 106 104 0.5532 0.4906 0.5000 1.26e-26 2xul-a1-m1-cA_2xul-a1-m1-cC
25 1ul3-a2-m3-cD 95 93 0.5532 0.5474 0.5591 1.79e-26 1ul3-a2-m2-cD_1ul3-a2-m3-cD
26 1ul3-a2-m2-cD 95 93 0.5532 0.5474 0.5591 1.79e-26 1ul3-a2-m2-cD_1ul3-a2-m3-cD
27 2xul-a1-m1-cC 107 105 0.5532 0.4860 0.4952 2.08e-26 2xul-a1-m1-cA_2xul-a1-m1-cC
28 1ul3-a3-m4-cB 94 94 0.5532 0.5532 0.5532 3.67e-26 1ul3-a3-m4-cB_1ul3-a3-m5-cA
29 1ul3-a3-m1-cC 94 94 0.5532 0.5532 0.5532 3.67e-26 1ul3-a3-m1-cC_1ul3-a3-m5-cA
30 3n5b-a1-m3-cA 112 111 0.5745 0.4821 0.4865 3.87e-26 3n5b-a1-m2-cA_3n5b-a1-m3-cA
31 3n5b-a1-m2-cA 112 111 0.5745 0.4821 0.4865 3.87e-26 3n5b-a1-m2-cA_3n5b-a1-m3-cA
32 4cnz-a1-m1-cB 100 99 0.5319 0.5000 0.5051 3.93e-26 4cnz-a1-m1-cA_4cnz-a1-m1-cB
33 4cnz-a1-m1-cA 100 99 0.5319 0.5000 0.5051 3.93e-26 4cnz-a1-m1-cA_4cnz-a1-m1-cB
34 1v3r-a1-m1-cA 92 91 0.4894 0.5000 0.5055 2.00e-25 1v3r-a1-m1-cC_1v3r-a1-m1-cA
35 3bzq-a1-m3-cA 99 90 0.4681 0.4444 0.4889 2.10e-25 3bzq-a1-m2-cA_3bzq-a1-m3-cA
36 3bzq-a1-m2-cA 99 90 0.4681 0.4444 0.4889 2.10e-25 3bzq-a1-m2-cA_3bzq-a1-m3-cA
37 3lf0-a1-m1-cC 101 93 0.4681 0.4356 0.4731 4.29e-25 3lf0-a1-m1-cC_3lf0-a1-m1-cB
38 2pii-a1-m3-cA 112 111 0.5532 0.4643 0.4685 7.38e-25 2pii-a1-m2-cA_2pii-a1-m3-cA
39 2pii-a1-m2-cA 112 111 0.5532 0.4643 0.4685 7.38e-25 2pii-a1-m2-cA_2pii-a1-m3-cA
40 7p50-a1-m1-cC 115 104 0.5000 0.4087 0.4519 1.12e-24 7p50-a1-m1-cB_7p50-a1-m1-cC
41 7p50-a1-m1-cB 115 104 0.5000 0.4087 0.4519 1.12e-24 7p50-a1-m1-cB_7p50-a1-m1-cC
42 4co2-a2-m3-cA 112 111 0.5319 0.4464 0.4505 2.76e-24 4co2-a2-m2-cA_4co2-a2-m3-cA
43 4co2-a2-m2-cA 112 111 0.5319 0.4464 0.4505 2.76e-24 4co2-a2-m2-cA_4co2-a2-m3-cA
44 1v3r-a1-m1-cC 90 91 0.4894 0.5111 0.5055 4.51e-24 1v3r-a1-m1-cC_1v3r-a1-m1-cA
45 1ufl-a2-m2-cC 99 98 0.5000 0.4747 0.4796 6.80e-24 1ufl-a2-m2-cC_1ufl-a2-m1-cA
46 3lf0-a1-m1-cB 112 105 0.4681 0.3929 0.4190 2.86e-23 3lf0-a1-m1-cC_3lf0-a1-m1-cB
47 2nuu-a4-m2-cK 112 111 0.4894 0.4107 0.4144 1.34e-22 2nuu-a4-m1-cH_2nuu-a4-m2-cK
48 2nuu-a4-m1-cH 112 111 0.4894 0.4107 0.4144 1.34e-22 2nuu-a4-m1-cH_2nuu-a4-m2-cK
49 2ns1-a1-m3-cB 113 111 0.4894 0.4071 0.4144 1.64e-22 2ns1-a1-m2-cB_2ns1-a1-m3-cB
50 2ns1-a1-m2-cB 113 111 0.4894 0.4071 0.4144 1.64e-22 2ns1-a1-m2-cB_2ns1-a1-m3-cB
51 1ufl-a2-m1-cA 108 108 0.5000 0.4352 0.4352 3.37e-22 1ufl-a2-m2-cC_1ufl-a2-m1-cA
52 3l7p-a1-m1-cB 88 88 0.4681 0.5000 0.5000 6.93e-21 3l7p-a1-m1-cB_3l7p-a1-m1-cF
53 1hwu-a3-m1-cA 99 93 0.5319 0.5051 0.5376 2.65e-20 1hwu-a3-m1-cA_1hwu-a3-m2-cD, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
54 3l7p-a1-m1-cF 88 87 0.4574 0.4886 0.4943 4.20e-20 3l7p-a1-m1-cB_3l7p-a1-m1-cF, 3l7p-a1-m1-cF_3l7p-a1-m1-cC
55 4ozn-a1-m1-cC 113 98 0.5000 0.4159 0.4796 8.93e-20 4ozn-a1-m1-cC_4ozn-a1-m1-cA
56 1hwu-a3-m2-cD 99 93 0.5213 0.4949 0.5269 3.55e-19 1hwu-a3-m1-cA_1hwu-a3-m2-cD
57 4ozn-a1-m1-cA 116 102 0.5000 0.4052 0.4608 3.60e-19 4ozn-a1-m1-cC_4ozn-a1-m1-cA
58 1hwu-a3-m2-cF 91 89 0.5106 0.5275 0.5393 6.18e-19 1hwu-a3-m2-cE_1hwu-a3-m2-cF, 1hwu-a3-m2-cF_1hwu-a3-m1-cA
59 1hwu-a3-m2-cE 84 88 0.5106 0.5714 0.5455 7.22e-19 1hwu-a3-m2-cE_1hwu-a3-m2-cF
60 3l7p-a1-m1-cC 91 91 0.4681 0.4835 0.4835 7.52e-19 3l7p-a1-m1-cF_3l7p-a1-m1-cC
61 2o66-a2-m2-cA 107 87 0.3936 0.3458 0.4253 1.04e-18 2o66-a2-m2-cC_2o66-a2-m2-cA
62 2o66-a2-m1-cA 107 87 0.3936 0.3458 0.4253 1.04e-18 2o66-a2-m2-cC_2o66-a2-m1-cA
63 2o66-a2-m2-cC 106 85 0.3830 0.3396 0.4235 5.87e-18 2o66-a2-m2-cC_2o66-a2-m1-cA, 2o66-a2-m2-cC_2o66-a2-m2-cA
64 2rd5-a1-m3-cD 126 104 0.4043 0.3016 0.3654 4.10e-16 2rd5-a1-m2-cD_2rd5-a1-m3-cD
65 2rd5-a1-m2-cD 126 104 0.4043 0.3016 0.3654 4.10e-16 2rd5-a1-m2-cD_2rd5-a1-m3-cD
66 7o4x-a1-m3-cA 103 94 0.4043 0.3689 0.4043 1.91e-14 7o4x-a1-m2-cA_7o4x-a1-m3-cA
67 7o4x-a1-m2-cA 103 94 0.4043 0.3689 0.4043 1.91e-14 7o4x-a1-m2-cA_7o4x-a1-m3-cA
68 4usj-a1-m3-cD 142 107 0.4362 0.2887 0.3832 9.28e-14 4usj-a1-m2-cD_4usj-a1-m3-cD
69 4usj-a1-m2-cD 142 107 0.4362 0.2887 0.3832 9.28e-14 4usj-a1-m2-cD_4usj-a1-m3-cD
70 4r25-a1-m3-cA 114 101 0.3617 0.2982 0.3366 2.61e-11 4r25-a1-m2-cA_4r25-a1-m3-cA
71 4r25-a1-m2-cA 114 101 0.3617 0.2982 0.3366 2.61e-11 4r25-a1-m2-cA_4r25-a1-m3-cA
72 2zxf-a1-m2-cA 530 52 0.1915 0.0340 0.3462 0.047 2zxf-a1-m1-cA_2zxf-a1-m2-cA
73 2zxf-a1-m1-cA 530 52 0.1915 0.0340 0.3462 0.047 2zxf-a1-m1-cA_2zxf-a1-m2-cA
74 3ros-a1-m2-cA 449 84 0.2766 0.0579 0.3095 0.32 3ros-a1-m1-cA_3ros-a1-m2-cA
75 3ros-a1-m1-cA 449 84 0.2766 0.0579 0.3095 0.32 3ros-a1-m1-cA_3ros-a1-m2-cA
76 4yd9-a1-m1-cb 1656 51 0.1596 0.0091 0.2941 1.1 4yd9-a1-m1-cA_4yd9-a1-m1-cb
77 4yd9-a1-m1-cA 1656 51 0.1596 0.0091 0.2941 1.1 4yd9-a1-m1-cA_4yd9-a1-m1-cb
78 5hh0-a1-m2-cA 195 37 0.1489 0.0718 0.3784 1.2 5hh0-a1-m1-cA_5hh0-a1-m2-cA
79 5hh0-a1-m1-cA 195 37 0.1489 0.0718 0.3784 1.2 5hh0-a1-m1-cA_5hh0-a1-m2-cA
80 4kr3-a1-m2-cA 466 35 0.1383 0.0279 0.3714 2.0 4kr3-a1-m1-cA_4kr3-a1-m2-cA
81 4kr3-a1-m1-cA 466 35 0.1383 0.0279 0.3714 2.0 4kr3-a1-m1-cA_4kr3-a1-m2-cA
82 4kqe-a1-m2-cA 597 35 0.1383 0.0218 0.3714 3.4 4kqe-a1-m1-cA_4kqe-a1-m2-cA
83 4kqe-a1-m1-cA 597 35 0.1383 0.0218 0.3714 3.4 4kqe-a1-m1-cA_4kqe-a1-m2-cA
84 1y4u-a1-m1-cA 472 63 0.2128 0.0424 0.3175 6.4 1y4u-a1-m1-cB_1y4u-a1-m1-cA
85 4bs9-a1-m2-cA 691 54 0.1702 0.0232 0.2963 7.5 4bs9-a1-m1-cA_4bs9-a1-m2-cA
86 4bs9-a1-m1-cA 691 54 0.1702 0.0232 0.2963 7.5 4bs9-a1-m1-cA_4bs9-a1-m2-cA
87 1siq-a1-m4-cA 390 59 0.1702 0.0410 0.2712 7.9 1siq-a1-m1-cA_1siq-a1-m4-cA, 1siq-a1-m2-cA_1siq-a1-m4-cA, 1siq-a1-m3-cA_1siq-a1-m4-cA
88 1siq-a1-m3-cA 390 59 0.1702 0.0410 0.2712 7.9 1siq-a1-m3-cA_1siq-a1-m4-cA
89 1siq-a1-m2-cA 390 59 0.1702 0.0410 0.2712 7.9 1siq-a1-m2-cA_1siq-a1-m4-cA
90 1siq-a1-m1-cA 390 59 0.1702 0.0410 0.2712 7.9 1siq-a1-m1-cA_1siq-a1-m4-cA
91 5fph-a7-m1-cF 384 67 0.1809 0.0443 0.2537 9.1 5fph-a7-m1-cF_5fph-a7-m1-cG
92 5fph-a6-m1-cF 384 67 0.1809 0.0443 0.2537 9.1 5fph-a6-m1-cF_5fph-a6-m1-cD

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Reference:
Jacob Schwartz et al.

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