HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=79)
MKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYSGGSGGIDISIELNKAKSD
LEESKEWIRRSNQKLDSIG

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	3n27-a1-m1-cB	79	79	1.0000	1.0000	1.0000	1.42e-51	3n27-a1-m1-cC_3n27-a1-m1-cB
2	3n27-a1-m1-cC	70	79	0.8734	0.9857	0.8734	5.02e-40	3n27-a1-m1-cC_3n27-a1-m1-cB
3	1wp7-a1-m1-cB	63	73	0.5316	0.6667	0.5753	2.88e-20	1wp7-a1-m1-cC_1wp7-a1-m1-cB
4	1wp7-a1-m1-cC	61	73	0.5063	0.6557	0.5479	2.61e-18	1wp7-a1-m1-cC_1wp7-a1-m1-cB
5	6xye-a1-m1-cF	357	39	0.1772	0.0392	0.3590	0.008	6xye-a1-m1-cD_6xye-a1-m1-cF
6	6xye-a1-m1-cD	357	39	0.1772	0.0392	0.3590	0.008	6xye-a1-m1-cD_6xye-a1-m1-cF
7	5yzc-a1-m3-cB	367	41	0.1519	0.0327	0.2927	0.008	5yzc-a1-m2-cB_5yzc-a1-m3-cB
8	5yzc-a1-m2-cB	367	41	0.1519	0.0327	0.2927	0.008	5yzc-a1-m2-cB_5yzc-a1-m3-cB
9	2fyz-a1-m1-cA	57	39	0.1772	0.2456	0.3590	0.012	2fyz-a1-m1-cA_2fyz-a1-m1-cC
10	2fyz-a1-m1-cC	58	39	0.1772	0.2414	0.3590	0.013	2fyz-a1-m1-cA_2fyz-a1-m1-cC
11	7kip-a1-m1-cC	1192	76	0.2785	0.0185	0.2895	0.63	7kip-a1-m1-cB_7kip-a1-m1-cC
12	7kip-a1-m1-cB	1192	76	0.2785	0.0185	0.2895	0.63	7kip-a1-m1-cB_7kip-a1-m1-cC
13	8fej-a1-m1-cC	456	38	0.1772	0.0307	0.3684	0.97	8fej-a1-m1-cB_8fej-a1-m1-cC
14	8fej-a1-m1-cB	456	38	0.1772	0.0307	0.3684	0.97	8fej-a1-m1-cB_8fej-a1-m1-cC
15	2gbw-a1-m1-cF	170	46	0.1266	0.0588	0.2174	1.8	2gbw-a1-m1-cB_2gbw-a1-m1-cF
16	2gbw-a1-m1-cB	170	46	0.1266	0.0588	0.2174	1.8	2gbw-a1-m1-cB_2gbw-a1-m1-cF
17	2ep7-a2-m2-cA	338	32	0.1646	0.0385	0.4062	1.8	2ep7-a2-m2-cA_2ep7-a2-m2-cB
18	2ep7-a2-m1-cA	338	32	0.1646	0.0385	0.4062	1.8	2ep7-a2-m1-cA_2ep7-a2-m2-cB
19	2ep7-a2-m2-cB	339	32	0.1646	0.0383	0.4062	1.8	2ep7-a2-m1-cA_2ep7-a2-m2-cB, 2ep7-a2-m1-cB_2ep7-a2-m2-cB, 2ep7-a2-m2-cA_2ep7-a2-m2-cB
20	2ep7-a2-m1-cB	339	32	0.1646	0.0383	0.4062	1.8	2ep7-a2-m1-cB_2ep7-a2-m2-cB
21	3r9v-a3-m1-cA	198	68	0.2785	0.1111	0.3235	3.1	3r9v-a3-m1-cB_3r9v-a3-m1-cA
22	2j0n-a1-m1-cB	187	68	0.2785	0.1176	0.3235	3.2	2j0n-a1-m1-cA_2j0n-a1-m1-cB
23	4gip-a1-m1-cF	375	40	0.1646	0.0347	0.3250	4.1	4gip-a1-m1-cE_4gip-a1-m1-cF
24	4gip-a1-m1-cE	375	40	0.1646	0.0347	0.3250	4.1	4gip-a1-m1-cE_4gip-a1-m1-cF
25	7y9n-a1-m1-cA	212	66	0.2532	0.0943	0.3030	5.6	7y9n-a1-m1-cB_7y9n-a1-m1-cA
26	8fel-a1-m1-cC	397	39	0.1772	0.0353	0.3590	6.2	8fel-a1-m1-cB_8fel-a1-m1-cC
27	8fel-a1-m1-cB	397	39	0.1772	0.0353	0.3590	6.2	8fel-a1-m1-cB_8fel-a1-m1-cC
28	5tdl-a1-m3-cA	450	35	0.1519	0.0267	0.3429	7.7	5tdl-a1-m2-cA_5tdl-a1-m3-cA
29	5tdl-a1-m2-cA	450	35	0.1519	0.0267	0.3429	7.7	5tdl-a1-m2-cA_5tdl-a1-m3-cA
30	6cvl-a1-m1-cC	343	59	0.1772	0.0408	0.2373	10.0	6cvl-a1-m1-cC_6cvl-a1-m1-cD

[Back]

Reference:
Jacob Schwartz et al.