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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
MKPESKEAPINIRAKASQRDLIDMAANLVAKSRTDFMLDAACREAQDILLDQRLFILDDE
QYDAFLAALDAPITAERQAKINALM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f37-a1-m1-cD 85 85 1.0000 1.0000 1.0000 9.85e-56 7f37-a1-m1-cF_7f37-a1-m1-cD
2 7f37-a1-m1-cF 84 83 0.9765 0.9881 1.0000 4.23e-54 7f37-a1-m1-cF_7f37-a1-m1-cD
3 7ak7-a1-m1-cC 87 65 0.3529 0.3448 0.4615 1.60e-10 7ak7-a1-m1-cE_7ak7-a1-m1-cC, 7ak7-a1-m1-cF_7ak7-a1-m1-cC
4 7ak7-a1-m1-cE 71 65 0.3529 0.4225 0.4615 2.08e-10 7ak7-a1-m1-cE_7ak7-a1-m1-cC, 7ak7-a1-m1-cE_7ak7-a1-m1-cF
5 7ak7-a1-m1-cF 73 65 0.3529 0.4110 0.4615 2.25e-10 7ak7-a1-m1-cE_7ak7-a1-m1-cF, 7ak7-a1-m1-cF_7ak7-a1-m1-cC
6 7ak8-a3-m1-cL 38 19 0.1176 0.2632 0.5263 0.69 7ak8-a3-m1-cK_7ak8-a3-m1-cL
7 7ak8-a3-m1-cK 37 19 0.1176 0.2703 0.5263 0.72 7ak8-a3-m1-cK_7ak8-a3-m1-cL
8 8haw-a1-m1-cB 478 51 0.1647 0.0293 0.2745 2.1 8haw-a1-m1-cA_8haw-a1-m1-cB
9 8haw-a1-m1-cA 478 51 0.1647 0.0293 0.2745 2.1 8haw-a1-m1-cA_8haw-a1-m1-cB
10 2yfo-a1-m4-cA 719 33 0.1294 0.0153 0.3333 2.1 2yfo-a1-m1-cA_2yfo-a1-m4-cA, 2yfo-a1-m2-cA_2yfo-a1-m4-cA, 2yfo-a1-m3-cA_2yfo-a1-m4-cA
11 2yfo-a1-m3-cA 719 33 0.1294 0.0153 0.3333 2.1 2yfo-a1-m3-cA_2yfo-a1-m4-cA
12 2yfo-a1-m2-cA 719 33 0.1294 0.0153 0.3333 2.1 2yfo-a1-m2-cA_2yfo-a1-m4-cA
13 2yfo-a1-m1-cA 719 33 0.1294 0.0153 0.3333 2.1 2yfo-a1-m1-cA_2yfo-a1-m4-cA
14 2w93-a2-m1-cC 557 67 0.2000 0.0305 0.2537 4.4 2w93-a2-m1-cC_2w93-a2-m1-cD
15 2w93-a2-m1-cD 562 67 0.2000 0.0302 0.2537 4.4 2w93-a2-m1-cC_2w93-a2-m1-cD
16 1qpb-a1-m2-cB 555 67 0.1882 0.0288 0.2388 9.5 1qpb-a1-m1-cA_1qpb-a1-m2-cB, 1qpb-a1-m1-cB_1qpb-a1-m2-cB
17 1qpb-a1-m2-cA 555 67 0.1882 0.0288 0.2388 9.5 1qpb-a1-m1-cA_1qpb-a1-m2-cA
18 1qpb-a1-m1-cB 555 67 0.1882 0.0288 0.2388 9.5 1qpb-a1-m1-cB_1qpb-a1-m2-cB
19 1qpb-a1-m1-cA 555 67 0.1882 0.0288 0.2388 9.5 1qpb-a1-m1-cA_1qpb-a1-m2-cA, 1qpb-a1-m1-cA_1qpb-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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