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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
MKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTV
KHLRNLQRAQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mh3-a1-m1-cB 70 70 1.0000 1.0000 1.0000 3.59e-44 2mh3-a1-m1-cA_2mh3-a1-m1-cB
2 2mh3-a1-m1-cA 70 70 1.0000 1.0000 1.0000 3.59e-44 2mh3-a1-m1-cA_2mh3-a1-m1-cB
3 7d8t-a1-m1-cB 199 62 0.3000 0.1055 0.3387 0.001 7d8t-a1-m1-cA_7d8t-a1-m1-cB
4 7d8t-a1-m1-cA 199 62 0.3000 0.1055 0.3387 0.001 7d8t-a1-m1-cA_7d8t-a1-m1-cB
5 7d8s-a2-m1-cC 184 55 0.2714 0.1033 0.3455 0.017 7d8s-a2-m1-cD_7d8s-a2-m1-cC
6 1am9-a1-m1-cD 76 58 0.2286 0.2105 0.2759 0.18 1am9-a1-m1-cD_1am9-a1-m1-cC
7 1am9-a1-m1-cC 82 58 0.2286 0.1951 0.2759 0.20 1am9-a1-m1-cD_1am9-a1-m1-cC
8 3bzw-a3-m1-cE 239 29 0.1714 0.0502 0.4138 0.51 3bzw-a3-m1-cD_3bzw-a3-m1-cE
9 3bzw-a3-m1-cD 239 29 0.1714 0.0502 0.4138 0.51 3bzw-a3-m1-cD_3bzw-a3-m1-cE
10 3bzw-a1-m1-cE 239 29 0.1714 0.0502 0.4138 0.51 3bzw-a1-m1-cC_3bzw-a1-m1-cE
11 3bzw-a1-m1-cC 239 29 0.1714 0.0502 0.4138 0.51 3bzw-a1-m1-cC_3bzw-a1-m1-cE
12 1mdy-a2-m1-cD 62 63 0.2286 0.2581 0.2540 0.55 1mdy-a2-m1-cC_1mdy-a2-m1-cD
13 1mdy-a2-m1-cC 62 63 0.2286 0.2581 0.2540 0.55 1mdy-a2-m1-cC_1mdy-a2-m1-cD
14 1an4-a1-m1-cB 65 62 0.2571 0.2769 0.2903 5.4 1an4-a1-m1-cA_1an4-a1-m1-cB
15 1an4-a1-m1-cA 65 62 0.2571 0.2769 0.2903 5.4 1an4-a1-m1-cA_1an4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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